ggKbase home page

L1_007_029G1_scaffold_530

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_530_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1114)
DNA (1113bp) protein (371aa)
Phage protein n=11 Tax=Escherichia coli RepID=B3I2W9_ECOLX
Phage protein {ECO:0000313|EMBL:KJC06977.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phage protein
L1_007_029G1_scaffold_530_2
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1107..1442)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Urbana str. R8-2977 RepID=G5RXF9_SALET
Uncharacterized protein {ECO:0000313|EMBL:EHD02096.1}; TaxID=913084 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Urbana str. R8-2977.;"
hypothetical protein
L1_007_029G1_scaffold_530_3
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1439..3517)
DNA (2079bp) protein (693aa)
TP901 family phage tail tape measure protein n=2 Tax=Salmonella enterica I RepID=V2A182_SALET
Tail protein {ECO:0000313|EMBL:ETC64129.1}; TaxID=1173817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str. 3402.;"
phage tail tape measure protein, TP901 family, core region
L1_007_029G1_scaffold_530_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3707..3982)
DNA (276bp) protein (92aa)
Phage protein n=12 Tax=Escherichia coli RepID=B3I2X2_ECOLX
Phage protein {ECO:0000313|EMBL:EHX30489.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
phage protein
L1_007_029G1_scaffold_530_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4088..4468)
DNA (381bp) protein (127aa)
Hypothetical phage-related protein n=1 Tax=Escherichia coli EC4100B PF3_ECOLX">RepID=E7UPF3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KJC06983.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L1_007_029G1_scaffold_530_6
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..4806)
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=Salmonella enterica I RepID=G5RXG4_SALET
Uncharacterized protein {ECO:0000313|EMBL:EHD02101.1}; TaxID=913084 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Urbana str. R8-2977.;"
hypothetical protein
L1_007_029G1_scaffold_530_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4793..5104)
DNA (312bp) protein (104aa)
Holin n=18 Tax=Enterobacteriaceae RepID=B3I2X6_ECOLX
Phage holin family 2 {ECO:0000313|EMBL:EHD02102.1}; TaxID=913084 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Urbana str. R8-2977.;"
Holin
L1_007_029G1_scaffold_530_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5109..5567)
DNA (459bp) protein (153aa)
Protein Phage n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. 40.E.08 RepID=N0SMS0_SALET
Tail protein {ECO:0000313|EMBL:KJC06986.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tail protein
L1_007_029G1_scaffold_530_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5564..6712)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli EC4100B PF7_ECOLX">RepID=E7UPF7_ECOLX
Phage tail protein {ECO:0000313|EMBL:KJC06987.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phage tail protein
L1_007_029G1_scaffold_530_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6715..7410)
DNA (696bp) protein (232aa)
Phage protein n=10 Tax=Escherichia coli RepID=B3I2X9_ECOLX
Phage protein {ECO:0000313|EMBL:EHX30496.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
Phage virion morphogenesis family protein
L1_007_029G1_scaffold_530_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7407..7883)
DNA (477bp) protein (159aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=B3I2Y0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHX30497.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
P2 phage tail completion protein R (GpR)
L1_007_029G1_scaffold_530_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7880..8353)
DNA (474bp) protein (158aa)
Phage head completion protein n=13 Tax=Enterobacteriaceae RepID=B3I2Y1_ECOLX
Head completion protein {ECO:0000313|EMBL:KJW35230.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
phage head completion family protein
L1_007_029G1_scaffold_530_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8458..9162)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=V2B9J4_SALET
Terminase {ECO:0000313|EMBL:KJC06991.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
terminase, endonuclease subunit
L1_007_029G1_scaffold_530_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9165..10187)
DNA (1023bp) protein (341aa)
Phage major capsid protein, P2 family n=12 Tax=Enterobacteriaceae RepID=B3I2Y3_ECOLX
Phage major capsid protein, P2 family {ECO:0000313|EMBL:EII37361.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
oxidoreductase
L1_007_029G1_scaffold_530_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10215..11276)
DNA (1062bp) protein (354aa)
Phage capsid scaffolding protein n=1 Tax=Escherichia coli EC4100B RepID=E7UPG1_ECOLX
Phage capsid protein {ECO:0000313|EMBL:KJW35233.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
capsid scaffolding protein
L1_007_029G1_scaffold_530_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..13269
DNA (1818bp) protein (606aa)
Phage terminase ATPase subunit n=2 Tax=Salmonella enterica I RepID=G5P1K5_SALET
Phage terminase ATPase subunit {ECO:0000313|EMBL:EHC56818.1}; TaxID=913077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Johannesburg str. S5-703.;"
hypothetical protein
L1_007_029G1_scaffold_530_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13266..14330
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 RepID=V2HVW2_SALAN
Phage portal protein {ECO:0000313|EMBL:KKC64531.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
portal protein
L1_007_029G1_scaffold_530_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14327..14653
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=V1JHU1_SALTH
Transcriptional regulator {ECO:0000313|EMBL:KJC06996.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L1_007_029G1_scaffold_530_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..16531)
DNA (1755bp) protein (585aa)
Putative phage replication protein A n=1 Tax=Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 RepID=V2I3E5_SALAN
Replication protein {ECO:0000313|EMBL:KJC06999.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
replication protein
Displaying 19 items

View Taxonomy