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L1_007_029G1_scaffold_587

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_587_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..639)
DNA (639bp) protein (213aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671};; EC=1.1.1.369 {ECO:0000256|HAMAP-Rule:MF_01671};; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TFW2_LACRL
iolG1; myo-inositol 2-dehydrogenase
L1_007_029G1_scaffold_587_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(670..2631)
DNA (1962bp) protein (654aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000256|HAMAP-Rule:MF_01669}; Short=THcHDO hydrolase {ECO:0000256|HAMAP-Rule:MF_01669};; EC=3.7.1.22 {ECO:0000256|HAMAP-Rule:MF_01669};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=3 Tax=Lactobacillus rhamnosus RepID=G7V2Q1_LACRH
iolD; 3D-(3, 5/4)-trihydroxycyclohexane-1,2-dione hydrolase
L1_007_029G1_scaffold_587_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2633..3607)
DNA (975bp) protein (325aa)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
5-dehydro-2-deoxygluconokinase n=4 Tax=Lactobacillus rhamnosus RepID=C7TFW0_LACRL
iolC; 5-dehydro-2-deoxygluconokinase
L1_007_029G1_scaffold_587_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3657..4472)
DNA (816bp) protein (272aa)
5-deoxy-glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_01673}; Short=5DG isomerase {ECO:0000256|HAMAP-Rule:MF_01673};; EC=5.3.1.30 {ECO:0000256|HAMAP-Rule:MF_01673};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
5-deoxy-glucuronate isomerase n=5 Tax=Lactobacillus rhamnosus RepID=C7TFV9_LACRL
iolB; 5-deoxy-glucuronate isomerase
L1_007_029G1_scaffold_587_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4506..5981)
DNA (1476bp) protein (492aa)
Methylmalonate semialdehyde dehydrogenase [acylating] {ECO:0000256|HAMAP-Rule:MF_01670}; Short=MMSA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01670};; Short=MMSDH {ECO:0000256|HAMAP-Rule:MF_01670};; Short=MSDH {ECO:0000256|HAMAP-Rule:MF_01670};; EC=1.2.1.27 {ECO:0000256|HAMAP-Rule:MF_01670};; Malonate semialdehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01670}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Methylmalonate semialdehyde dehydrogenase [acylating] n=5 Tax=Lactobacillus rhamnosus RepID=C7T964_LACRG
iolA; methylmalonate-semialdehyde dehydrogenase
L1_007_029G1_scaffold_587_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6375..7862)
DNA (1488bp) protein (496aa)
Transporter, major facilitator superfamily MFS_1, Myo-inositol transporter n=5 Tax=Lactobacillus rhamnosus RepID=C7TFV7_LACRL
MFS transporter, sugar porter family protein
Major myo-inositol transporter IolT {ECO:0000313|EMBL:AGP72947.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_587_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8286..9080
DNA (795bp) protein (265aa)
Transcriptional regulator, DeoR family n=4 Tax=Lactobacillus rhamnosus RepID=C7TFV6_LACRL
iolR; transcriptional regulator DeoR family
Alkaline phosphatase {ECO:0000313|EMBL:KIC97824.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_587_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9237..10097)
DNA (861bp) protein (287aa)
Oxidoreductase, aldo/keto reductase family n=7 Tax=Lactobacillus rhamnosus RepID=C7TFV5_LACRL
aldo/keto reductase family protein
Oxidoreductase of aldo/keto reductase family {ECO:0000313|EMBL:AGP72945.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_587_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10244..10996)
DNA (753bp) protein (251aa)
Aspartate racemase {ECO:0000313|EMBL:EKS49042.1}; EC=5.1.1.13 {ECO:0000313|EMBL:EKS49042.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Aspartate racemase n=7 Tax=Lactobacillus rhamnosus RepID=C7TFV4_LACRL
racD; aspartate racemase
L1_007_029G1_scaffold_587_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11002..12555)
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=4 Tax=Lactobacillus rhamnosus RepID=C7TFV3_LACRL
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
L1_007_029G1_scaffold_587_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12753..13250)
DNA (498bp) protein (166aa)
Transcription elongation factor GreA n=7 Tax=Lactobacillus rhamnosus RepID=B5QM62_LACRH
transcription elongation factor, GreA/GreB, C-term family protein
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_587_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13615..14925)
DNA (1311bp) protein (437aa)
D-alanyl-D-alanine carboxypeptidase DacA {ECO:0000313|EMBL:EEN81776.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EEN81776.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
D-alanyl-D-alanine carboxypeptidase n=10 Tax=Lactobacillus rhamnosus RepID=C7TFV0_LACRL
dacA; D-alanyl-D-alanine carboxypeptidase
L1_007_029G1_scaffold_587_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14922..15173)
DNA (252bp) protein (84aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
Osmosensitive K+ channel histidine kinase KdpD n=2 Tax=Lactobacillus rhamnosus RepID=S4ZU89_LACRH
vanS; two component sensor transduction histidine kinase
Displaying 13 items

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