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L1_007_029G1_scaffold_857

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_857_1
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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348..902
DNA (555bp) protein (185aa)
Carbonic anhydrase family protein n=7 Tax=Klebsiella RepID=B5XND1_KLEP3
hypothetical protein
Carbonic anhydrase family protein {ECO:0000313|EMBL:CDA04097.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
L1_007_029G1_scaffold_857_2
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(878..1135)
DNA (258bp) protein (86aa)
YrdB n=3 Tax=Klebsiella RepID=D6GKG9_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL86290.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
L1_007_029G1_scaffold_857_3
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1132..1950)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
Shikimate dehydrogenase n=8 Tax=Klebsiella RepID=B5XNC9_KLEP3
aroE; shikimate 5-dehydrogenase
L1_007_029G1_scaffold_857_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1954..2526)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
Threonylcarbamoyl-AMP synthase n=8 Tax=Klebsiella RepID=B5XNC8_KLEP3
ribosome maturation factor
L1_007_029G1_scaffold_857_5
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2531..3073)
DNA (543bp) protein (181aa)
Klebsiella pneumoniae subsp. rhinoscleromatis strain SB3432, complete genome n=139 Tax=Bacteria RepID=R4YG43_KLEPN
putative DNA topoisomerase
Zn-finger domain associated with topoisomerase type I {ECO:0000313|EMBL:AHM77275.1}; TaxID=1420013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30684/NJST258_2.;"
L1_007_029G1_scaffold_857_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3100..3573)
DNA (474bp) protein (158aa)
Protein Smg n=8 Tax=Klebsiella RepID=SMG_KLEP3
hypothetical protein
Protein Smg {ECO:0000255|HAMAP-Rule:MF_00598}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L1_007_029G1_scaffold_857_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3545..4669)
DNA (1125bp) protein (375aa)
DNA protecting protein DprA n=3 Tax=Klebsiella RepID=D3RED1_KLEVT
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:EWD78845.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L1_007_029G1_scaffold_857_8
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4798..5307
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
Peptide deformylase n=8 Tax=Klebsiella RepID=DEF_KLEP3
peptide deformylase
L1_007_029G1_scaffold_857_9
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5322..6269
DNA (948bp) protein (316aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
Methionyl-tRNA formyltransferase n=4 Tax=Klebsiella RepID=D6GKG2_9ENTR
L1_007_029G1_scaffold_857_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6322..7617
DNA (1296bp) protein (432aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
Ribosomal RNA small subunit methyltransferase B n=6 Tax=Klebsiella RepID=D6GKG1_9ENTR
16S rRNA methyltransferase
L1_007_029G1_scaffold_857_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7631..9007
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein TrkA n=8 Tax=Klebsiella RepID=B5XNC1_KLEP3
trkA; potassium transporter peripheral membrane component
Trk system potassium uptake protein trkA {ECO:0000313|EMBL:EWD78849.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L1_007_029G1_scaffold_857_12
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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9148..9561
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=147 Tax=Bacteria RepID=MSCL_KLEP3
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
L1_007_029G1_scaffold_857_13
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9497..9775)
DNA (279bp) protein (93aa)
Uncharacterized protein n=7 Tax=Klebsiella RepID=D3REC5_KLEVT
ribosome rescue factor A
Uncharacterized protein {ECO:0000313|EMBL:ADC56342.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
L1_007_029G1_scaffold_857_14
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10258)
DNA (426bp) protein (142aa)
Zn(II)-responsive transcriptional regulator n=8 Tax=Klebsiella RepID=B5XNB9_KLEP3
zntR; zinc-responsive transcriptional regulator
DNA-binding transcriptional activator in response to Zn(II) {ECO:0000313|EMBL:CEL86279.1}; ZntR protein {ECO:0000313|EMBL:CEP32393.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
L1_007_029G1_scaffold_857_15
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..10629)
DNA (369bp) protein (123aa)
DnaJ-like protein n=5 Tax=Klebsiella RepID=D3REC3_KLEVT
hypothetical protein
DnaJ-like protein {ECO:0000313|EMBL:CDA03974.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
L1_007_029G1_scaffold_857_16
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10738..10869)
DNA (132bp) protein (44aa)
50S ribosomal protein L17 n=150 Tax=Bacteria RepID=RL17_KLEP3
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
Displaying 16 items

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