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L1_007_029G1_scaffold_957

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_957_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..178
DNA (177bp) protein (59aa)
30S ribosomal protein S13 n=5 Tax=Bifidobacterium breve RepID=F9XYA2_BIFBU
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_957_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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266..664
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=26 Tax=Bifidobacterium RepID=RS11_BIFLD
rpsK; SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_957_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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745..1740
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
DNA-directed RNA polymerase subunit alpha n=18 Tax=Bifidobacterium RepID=RPOA_BIFLO
DNA-directed RNA polymerase alpha subunit
L1_007_029G1_scaffold_957_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1840..2382
DNA (543bp) protein (181aa)
50S ribosomal protein L17 n=12 Tax=Bifidobacterium RepID=D6ZWA1_BIFLJ
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_957_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2464..3375)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
tRNA pseudouridine synthase A n=12 Tax=Bifidobacterium longum RepID=TRUA_BIFLD
tRNA pseudouridine synthase A
L1_007_029G1_scaffold_957_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3651..5831
DNA (2181bp) protein (727aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GV82_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80934.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L1_007_029G1_scaffold_957_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5860..6837
DNA (978bp) protein (326aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GV83_BIFLN
hypothetical protein
Transglutaminase-like protein {ECO:0000313|EMBL:EEI80935.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_957_8
unknown

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7003..7101
DNA (99bp) protein (33aa)

This feature has no annotations

L1_007_029G1_scaffold_957_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7647..9215
DNA (1569bp) protein (523aa)
Exo-alpha-(1->6)-L-arabinofuranosidase n=11 Tax=Bifidobacterium RepID=16ABF_BIFLN
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:AIW44251.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
alpha-L-arabinosidase
L1_007_029G1_scaffold_957_10
unknown

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comp(9365..9535)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 10 items

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