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L1_007_029G1_scaffold_1109

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_1109_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..119
DNA (117bp) protein (39aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CA90_BIFBR
transposase
Transposase {ECO:0000313|EMBL:ACA23201.1}; Flags: Fragment;; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_029G1_scaffold_1109_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169..519)
DNA (351bp) protein (117aa)
NIL domain protein n=5 Tax=Bifidobacterium longum RepID=C2GW55_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71548.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_029G1_scaffold_1109_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(578..763)
DNA (186bp) protein (62aa)
NADPH-quinone reductase n=14 Tax=Bifidobacterium longum RepID=B3DQ45_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ29842.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_1109_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

826..1095
DNA (270bp) protein (90aa)
Rrf2 family transcriptional regulator, group III n=3 Tax=Bifidobacterium longum RepID=S3DKZ1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67033.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_1109_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1206..1457)
DNA (252bp) protein (84aa)
Glutaredoxin n=8 Tax=Bifidobacterium RepID=B3DQ43_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95105.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_1109_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1706..2938)
DNA (1233bp) protein (411aa)
Cystathionine beta-lyase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUV8_BIFL1
cystathionine beta-lyase
Cystathionine beta-lyase {ECO:0000313|EMBL:BAJ71552.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_029G1_scaffold_1109_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3174..4076)
DNA (903bp) protein (301aa)
ABC-type amino acid transport system periplasmic component n=11 Tax=Bifidobacterium RepID=B3DQ41_BIFLD
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EIJ26298.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_1109_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4142..4933)
DNA (792bp) protein (264aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC-type amino acid transport system ATPase component n=7 Tax=Bifidobacterium longum RepID=B3DQ40_BIFLD
ABC-type amino acid transport system ATPase component {ECO:0000313|EMBL:ACD97539.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_1109_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4926..5600)
DNA (675bp) protein (225aa)
ABC-type amino acid transport system permease component n=6 Tax=Bifidobacterium longum RepID=B3DQ39_BIFLD
amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-)
ABC-type amino acid transport system permease component {ECO:0000313|EMBL:ACD97538.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_1109_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5587..6246)
DNA (660bp) protein (220aa)
Permease protein of ABC transporter system n=16 Tax=Bifidobacterium RepID=Q8G809_BIFLO
amino acid ABC transporter permease
Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAJ67039.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_1109_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6474..7124
DNA (651bp) protein (217aa)
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EEI80649.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEI80649.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Phospholipase/carboxylesterase n=7 Tax=Bifidobacterium longum RepID=C2GW44_BIFLN
esterase
L1_007_029G1_scaffold_1109_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7175..8095)
DNA (921bp) protein (307aa)
Ribosome protection-type tetracycline resistance related protein, group 2 n=2 Tax=Bifidobacterium longum RepID=S3EJK1_BIFLN
elongation factor
GTP-binding domain protein {ECO:0000313|EMBL:EIJ29828.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_1109_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8220..9335)
DNA (1116bp) protein (372aa)
GTP-binding domain protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AWN2_BIFLN
elongation factor
GTP-binding protein {ECO:0000313|EMBL:KEY21731.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_1109_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9482..10189
DNA (708bp) protein (236aa)
DNA polymerase III alpha subunit n=12 Tax=Bifidobacterium RepID=B3DQ35_BIFLD
polC; polc
DNA polymerase III subunit alpha {ECO:0000313|EMBL:KEY21730.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_1109_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10191..10781)
DNA (591bp) protein (197aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Guanylate kinase n=17 Tax=Bifidobacterium RepID=KGUA_BIFLO
guanylate kinase
L1_007_029G1_scaffold_1109_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10961..11881)
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EEQ56225.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EEQ56225.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Orotidine 5'-phosphate decarboxylase n=17 Tax=Bifidobacterium RepID=F8AUA9_BIFLN
orotidine 5'-phosphate decarboxylase
L1_007_029G1_scaffold_1109_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11881..15195)
DNA (3315bp) protein (1105aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Bifidobacterium RepID=E8MEB8_BIFL2
carbamoyl phosphate synthase large subunit
Displaying 17 items

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