ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_007_029G1_scaffold_273_20

Organism: L1_007_029G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(21850..22518)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 459
  • Evalue 1.40e-126
endonuclease III n=1 Tax=Bifidobacterium breve RepID=UPI0002E044A2 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 459
  • Evalue 9.90e-127
Endonuclease III similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 459
  • Evalue 2.80e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium breve → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGAGAAACCAAAACCGCGCGCATAGAGCGCATGCACAAGGAATACGACATTCTATGCCGTATGATTCCGCAACCGCAGTGCGCCCTGCATTTCACCTCCCCGCTTCAACTGCTTATCGCCACTGTGCTCAGCGCCCAGACCACCGACAAGCGTGTCAATACGGTCACCCCCGAACTGTTCGCCACGTATCCCACGGCTCATGATTTGGCAGAGGCCAGCCCGGCTCAGATCGAGGATATTATCCATCCGCTCGGCTTCTACCGATCGAAAACCCAGCATCTCATCGGCTTGGCCACGGCATTGGACGAACGCTTTGACGGCCAGGTCCCACAATCGATGGATGAGCTGACCAGCCTGCCAGGCGTTGGCCGCAAAACCGCCAATGTGGTGCTGGGCAACGCTTTCGGCATTCCCGGCTTTCCCGTGGACACTCACGTGATGCGCGTGACCGGTCGTCTGCGCTGGCGATCGGATTGGCGCTCCACTCATCTGGATCCCGTGAAAATCGAGCGGGAGATTACCGCATGCTTCCCACCTGAAGAGTGGACGGATCTCAGCCATCGGCTTATCCTGTTCGGCCGATCCACCTGTCATGCCCGCACGCCGGACTGCGCCAACTGCCCGCTGGCCGCCACCTGCCCCAGCGCTGGGATCAGTACAAAGTGA
PROTEIN sequence
Length: 223
MRETKTARIERMHKEYDILCRMIPQPQCALHFTSPLQLLIATVLSAQTTDKRVNTVTPELFATYPTAHDLAEASPAQIEDIIHPLGFYRSKTQHLIGLATALDERFDGQVPQSMDELTSLPGVGRKTANVVLGNAFGIPGFPVDTHVMRVTGRLRWRSDWRSTHLDPVKIEREITACFPPEEWTDLSHRLILFGRSTCHARTPDCANCPLAATCPSAGISTK*