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L1_007_029G1_scaffold_273

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_273_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
gatB; Glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y100_BIFBU
L1_007_029G1_scaffold_273_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

463..1509
DNA (1047bp) protein (349aa)
Acetyltransferase, GNAT family n=4 Tax=Bifidobacterium breve RepID=F6C6X9_BIFBA
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI87999.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_273_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1516..1830
DNA (315bp) protein (105aa)
Uncharacterized protein n=24 Tax=Bifidobacterium RepID=B3DU29_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71152.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_029G1_scaffold_273_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2001..3614
DNA (1614bp) protein (538aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C6Y1_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:AEF26808.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Hypothetical protein, possibly FAD-containing oxidoreductase
L1_007_029G1_scaffold_273_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3974..5950
DNA (1977bp) protein (659aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
rho; transcription termination factor Rho (EC:3.6.4.-)
Transcription termination factor Rho n=2 Tax=Bifidobacterium breve RepID=F6C6Y2_BIFBA
L1_007_029G1_scaffold_273_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6113..6535
DNA (423bp) protein (141aa)
Aminotransferase, class IV n=2 Tax=Bifidobacterium breve RepID=F6C6Y3_BIFBA
aminotransferase, class IV domain protein
Aminotransferase, class IV domain protein {ECO:0000313|EMBL:AHJ18594.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_029G1_scaffold_273_7
unknown

Not on your lists

6632..6883
DNA (252bp) protein (84aa)

This feature has no annotations

L1_007_029G1_scaffold_273_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6819..7406)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIF1_BIFBR
transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD76563.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_273_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7549..8148
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BM89_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89908.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L1_007_029G1_scaffold_273_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8305..9180
DNA (876bp) protein (292aa)
Transcriptional regulator, AraC family n=5 Tax=Bifidobacterium breve RepID=F6C6Y4_BIFBA
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AHJ20511.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9449..10771
DNA (1323bp) protein (441aa)
ABC transporter, solute-binding protein n=5 Tax=Bifidobacterium breve RepID=F6C6Y5_BIFBA
Solute-binding protein of ABC transporter system for sugars, galactan metabolism
Solute-binding protein of ABC transporter system for sugars, galactan metabolism {ECO:0000313|EMBL:AHJ20512.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10870..11760
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C6Y6_BIFBA
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AHJ20513.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11762..12631
DNA (870bp) protein (290aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C6Y7_BIFBA
Sugar ABC transporter, permease protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76567.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_273_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12674..14476
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYS0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76568.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
alpha-galactosidase family protein
L1_007_029G1_scaffold_273_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14554..14757
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BM95_BIFBR
putative transposase
Uncharacterized protein {ECO:0000313|EMBL:EFE89914.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_273_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14876..15265
DNA (390bp) protein (130aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase {ECO:0000313|EMBL:AEF27967.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AEF27967.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Chorismate mutase n=2 Tax=Bifidobacterium breve RepID=F6C6Y9_BIFBA
L1_007_029G1_scaffold_273_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15412..17397
DNA (1986bp) protein (662aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BM97_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89916.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
putative secreted protein
L1_007_029G1_scaffold_273_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17430..20165)
DNA (2736bp) protein (912aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Valine--tRNA ligase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y110_BIFBU
Valyl-tRNA synthetase
L1_007_029G1_scaffold_273_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20286..21821)
DNA (1536bp) protein (512aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CV95_BIFBR
Solute binding protein of ABC transporter system for peptides
Solute binding protein of ABC transporter system for peptides {ECO:0000313|EMBL:AHJ20519.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21850..22518)
DNA (669bp) protein (223aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
endonuclease III n=1 Tax=Bifidobacterium breve RepID=UPI0002E044A2
Endonuclease III
L1_007_029G1_scaffold_273_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22543..23313)
DNA (771bp) protein (257aa)
transcriptional regulator n=1 Tax=Bifidobacterium breve RepID=UPI00031E1E35
Transcriptional regulatory protein glnR
Transcriptional regulatory protein glnR {ECO:0000313|EMBL:AHJ20521.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23486..24190)
DNA (705bp) protein (235aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI000318C2E9
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20522.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_273_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24250..24828)
DNA (579bp) protein (193aa)
Putative manganese efflux pump MntP n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6Z6_BIFBA
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_273_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25002..25283)
DNA (282bp) protein (94aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Inorganic pyrophosphatase n=5 Tax=Bifidobacterium RepID=B3DU17_BIFLD
ppa; inorganic pyrophosphatase
Displaying 24 items

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