ggKbase home page

L1_007_029G1_scaffold_1413_6

Organism: L1_007_029G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 5403..5615

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:ABE95222.1}; EC=4.2.1.70 {ECO:0000313|EMBL:ABE95222.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 118
  • Evalue 3.10e-24
Pseudouridine synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU03_BIFBR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 118
  • Evalue 2.20e-24
Ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 118
  • Evalue 6.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium breve → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGACGTGCTGTATGAGGACGAGCGGATCATCGTGGTGGACAAGCCGCATTTTCTGGCCACCATGCCACGCGGCATGTGGTATCGCGAAACCGCGCTGATCCGATTGCGCGAGCGTCTGGGGGAGCCGGATATCACACCGGCCCACCGTTTGGATCGCATGACTGCGTGGCCGCCTTCGAGGAGCCAGGCGCAGTCAATGCTGAAACCCTGA
PROTEIN sequence
Length: 71
MDVLYEDERIIVVDKPHFLATMPRGMWYRETALIRLRERLGEPDITPAHRLDRMTAWPPSRSQAQSMLKP*