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L1_007_029G1_scaffold_1413

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_1413_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..277
DNA (276bp) protein (92aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZS3_BIFLN
Solute-binding protein of ABC transporter system
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFE89013.1}; Putative ABC transporter substrate binding component {ECO:0000313|EMBL:BAQ99482.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_1413_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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411..1352
DNA (942bp) protein (314aa)
ABC transporter substrate-binding protein n=5 Tax=Bifidobacterium longum RepID=F8ASB9_BIFLN
ABC transporter solute-binding protein
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEI81209.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_1413_3
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1483..2379
DNA (897bp) protein (299aa)
Transcriptional regulator, Fis family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSY0_BIFLJ
Fis family transcriptional regulator
ABC superfamily ATP binding cassette transporter, permease protein {ECO:0000313|EMBL:KFJ03450.1}; TaxID=79262 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. thermacidophilum.;"
L1_007_029G1_scaffold_1413_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2395..3225
DNA (831bp) protein (277aa)
ABC-type polar amino acid transport system ATPase component n=6 Tax=Bifidobacterium RepID=B3DTB1_BIFLD
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY33155.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ABC transporter ATP-binding protein
L1_007_029G1_scaffold_1413_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3467..5359
DNA (1893bp) protein (631aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASP8_BIFLN
glmS; glucosamine--fructose-6-phosphate aminotransferase
L1_007_029G1_scaffold_1413_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5403..5615
DNA (213bp) protein (71aa)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:ABE95222.1}; EC=4.2.1.70 {ECO:0000313|EMBL:ABE95222.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Pseudouridine synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU03_BIFBR
Ribosomal large subunit pseudouridine synthase D
L1_007_029G1_scaffold_1413_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5570..5932
DNA (363bp) protein (121aa)
Pseudouridine synthase n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3ARZ2_BIFLN
23S rRNA pseudouridylate synthase
RNA pseudouridine synthase domain protein {ECO:0000313|EMBL:EIJ21885.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_1413_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5975..7288)
DNA (1314bp) protein (438aa)
HipA domain-containing protein {ECO:0000313|EMBL:KFI71927.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI71927.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
HipA domain protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSY4_BIFLJ
transcriptional regulator
L1_007_029G1_scaffold_1413_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7278..7517)
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein n=8 Tax=Bifidobacterium longum RepID=C5E8J9_BIFLI
DNA-binding protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI81203.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_1413_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7683..8693)
DNA (1011bp) protein (337aa)
Regulatory protein, LacI n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSY6_BIFLJ
LacI-type transcriptional regulator
Probable LacI-type transcriptional regulator {ECO:0000313|EMBL:AAN24976.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_1413_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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8916..9842
DNA (927bp) protein (309aa)
Probable permease of ABC transporter system for sugars n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G550_BIFLO
ABC transporter permease
ABC transporter permease component {ECO:0000313|EMBL:CCY95793.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_1413_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9901..10908
DNA (1008bp) protein (336aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium RepID=I3ARX3_BIFLN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43434.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_1413_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11100..11399
DNA (300bp) protein (100aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Beta-galactosidase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MVI9_9BIFI
lacA1; laca1
Displaying 13 items

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