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L1_007_061G1_scaffold_1277

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_1277_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(73..1674)
DNA (1602bp) protein (534aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
L1_007_061G1_scaffold_1277_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1793..2236)
DNA (444bp) protein (148aa)
Regulatory protein RecX n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
regulatory protein RecX
L1_007_061G1_scaffold_1277_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2239..3279)
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
recA protein
L1_007_061G1_scaffold_1277_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3284..4531)
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KII7_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
competence/damage-inducible protein CinA
L1_007_061G1_scaffold_1277_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4569..5744)
DNA (1176bp) protein (392aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK1_9FIRM
MiaB-like tRNA modifying enzyme YliG
L1_007_061G1_scaffold_1277_6
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5782..6819)
DNA (1038bp) protein (346aa)
Iron ABC transporter substrate-binding protein n=3 Tax=Veillonella RepID=T0T3U4_9FIRM
Putative periplasmic ferric iron-binding protein {ECO:0000313|EMBL:EFG23936.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
extracellular solute-binding protein
L1_007_061G1_scaffold_1277_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6876..8822)
DNA (1947bp) protein (649aa)
UPF0313 protein HSIVP1_626 n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T442_9FIRM
UPF0313 protein HSIVP1_626 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
radical SAM protein
L1_007_061G1_scaffold_1277_8
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8862..9314)
DNA (453bp) protein (151aa)
Transcriptional regulator, nRE family n=4 Tax=Veillonella RepID=T0UFE1_9FIRM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFG23938.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
XRE family transcriptional regulator
L1_007_061G1_scaffold_1277_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9363..11849)
DNA (2487bp) protein (829aa)
Cell division protein FtsK n=1 Tax=Veillonella parvula HSIVP1 RepID=T0U7N9_9FIRM
Cell division protein FtsK {ECO:0000313|EMBL:EQC65899.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
cell division protein FtsK
L1_007_061G1_scaffold_1277_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11932..13050)
DNA (1119bp) protein (373aa)
ATPase, AAA family n=3 Tax=Veillonella RepID=T0SWX4_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EGL76602.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ATPase AAA
L1_007_061G1_scaffold_1277_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13548..13919)
DNA (372bp) protein (124aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EGL76438.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EGL76438.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Aspartate--tRNA ligase n=2 Tax=Veillonella parvula RepID=T0T3U8_9FIRM
aspartyl-tRNA synthetase
Displaying 11 items

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