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L1_007_061G1_scaffold_32

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Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_32_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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205..813
DNA (609bp) protein (203aa)
Putative lipoprotein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. Ty21a RepID=N0C1J0_SALTI
putative lipoprotein
Lipoprotein {ECO:0000313|EMBL:CEV12114.1}; TaxID=90371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhimurium.;"
L1_007_061G1_scaffold_32_2
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1289..1477)
DNA (189bp) protein (63aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=N0C7W0_SALTI
hypothetical protein
Bacteriophage protein {ECO:0000313|EMBL:CRF73712.1}; Salmonella enterica subsp. enterica serovar Typhi genome assembly 10541_1#60 {ECO:0000313|EMBL:CEP54644.1}; Uncharacterised protein {ECO:0000313|EMBL:CEQ51246.1}; Uncharacterized protein {ECO:0000313|EMBL:CAD09430.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
L1_007_061G1_scaffold_32_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1631..4045)
DNA (2415bp) protein (805aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE100 RepID=S1HE58_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW09373.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
replication protein for prophage
L1_007_061G1_scaffold_32_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4042..4899)
DNA (858bp) protein (286aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
retron adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=8 Tax=Escherichia coli RepID=D7XY34_ECOLX
L1_007_061G1_scaffold_32_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4896..5123)
DNA (228bp) protein (76aa)
Transcriptional regulator, trar/dksa family n=68 Tax=Enterobacteriaceae RepID=J7QDC0_ECOLX
TraR/DksA family transcriptional regulator
Phage/conjugal plasmid C-4 type zinc finger protein, TraR family {ECO:0000313|EMBL:EII46663.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L1_007_061G1_scaffold_32_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5123..5356)
DNA (234bp) protein (78aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D7XY36_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI46581.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
hypothetical protein
L1_007_061G1_scaffold_32_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5424..5765)
DNA (342bp) protein (114aa)
Uncharacterized protein n=92 Tax=Enterobacteriaceae RepID=B7MJJ7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZA29205.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L1_007_061G1_scaffold_32_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5788..6012)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=H4X302_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEJ70113.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
hypothetical protein
L1_007_061G1_scaffold_32_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6187..6696)
DNA (510bp) protein (170aa)
Regulatory cii family protein n=161 Tax=Enterobacteriaceae RepID=J7QZ45_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW26522.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L1_007_061G1_scaffold_32_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6761..6964)
DNA (204bp) protein (68aa)
Uncharacterized protein n=44 Tax=Enterobacteriaceae RepID=D7XY40_ECOLX
Putative dNA-binding protein {ECO:0000313|EMBL:KDZ38064.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
coxT; putative regulator for prophage
L1_007_061G1_scaffold_32_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7110..7679
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE100 RepID=S1H1G2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW09365.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
repressor protein
L1_007_061G1_scaffold_32_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7695..7910
DNA (216bp) protein (72aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=N0C7U7_SALTI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW09364.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_007_061G1_scaffold_32_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8074..9126
DNA (1053bp) protein (351aa)
Phage integrase family protein n=2 Tax=Escherichia coli RepID=N2WVR1_ECOLX
Phage integrase family protein {ECO:0000313|EMBL:KDZ38066.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
integrase
L1_007_061G1_scaffold_32_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9231..9767)
DNA (537bp) protein (179aa)
Uncharacterized HTH-type transcriptional regulator YbjK n=212 Tax=Escherichia RepID=YBJK_ECOLI
ybjK; DNA-binding transcriptional regulator
TetR-family transcriptional regulatory protein {ECO:0000313|EMBL:END94574.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L1_007_061G1_scaffold_32_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9932..11059
DNA (1128bp) protein (376aa)
Inner membrane protein YbjJ n=504 Tax=Escherichia RepID=YBJJ_ECOLI
major facilitator superfamily protein
Inner membrane protein ybjJ {ECO:0000313|EMBL:EOU75068.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L1_007_061G1_scaffold_32_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11059..11874
DNA (816bp) protein (272aa)
Putative phosphatase {ECO:0000313|EMBL:CEK03930.1}; EC=3.1.3.- {ECO:0000313|EMBL:CEK03930.1};; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
Uncharacterized protein n=75 Tax=Enterobacteriaceae RepID=C8TLW0_ECO26
ybjI; hypothetical protein
L1_007_061G1_scaffold_32_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11966..12244
DNA (279bp) protein (93aa)
Uncharacterized protein n=67 Tax=Enterobacteriaceae RepID=B6I8G3_ECOSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV80077.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L1_007_061G1_scaffold_32_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..13517)
DNA (1233bp) protein (411aa)
Multidrug transporter MdfA n=711 Tax=Escherichia RepID=MDFA_ECO57
cmr; multidrug translocase MdfA
Multidrug transporter MdfA {ECO:0000313|EMBL:EHU26832.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L1_007_061G1_scaffold_32_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13802..14398
DNA (597bp) protein (199aa)
Putative undecaprenyl-diphosphatase YbjG n=204 Tax=Escherichia RepID=YBJG_ECOLI
hypothetical protein
Undecaprenyl pyrophosphate phosphatase {ECO:0000313|EMBL:ELD72048.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
L1_007_061G1_scaffold_32_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14456..15214
DNA (759bp) protein (253aa)
Deoxyribose operon repressor n=903 Tax=Enterobacteriaceae RepID=DEOR_ECO57
deoR; DNA-binding transcriptional repressor DeoR
Deoxyribose operon repressor {ECO:0000313|EMBL:EOV64130.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_061G1_scaffold_32_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15261..16463)
DNA (1203bp) protein (401aa)
dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacC {ECO:0000313|EMBL:EFK26192.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFK26192.1};; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
D-alanyl-D-alanine carboxypeptidase DacC n=186 Tax=Escherichia RepID=DACC_ECOLI
L1_007_061G1_scaffold_32_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16710..17336
DNA (627bp) protein (209aa)
Glutathione S-transferase GstB n=1270 Tax=Enterobacteriaceae RepID=GSTB_ECOL6
glutathione S-transferase domain protein
Glutathione S-transferase family protein {ECO:0000313|EMBL:EGI22187.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L1_007_061G1_scaffold_32_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17333..18448)
DNA (1116bp) protein (372aa)
Soluble aldose sugar dehydrogenase yliI {ECO:0000313|EMBL:ENA46898.1}; EC=1.1.5.- {ECO:0000313|EMBL:ENA46898.1};; TaxID=1125641 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.2.;"
Glucose / sorbosone dehydrogenase protein n=70 Tax=Escherichia coli RepID=B2N669_ECOLX
putative dehydrogenase
L1_007_061G1_scaffold_32_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18559..18942)
DNA (384bp) protein (128aa)
YliH n=1 Tax=uncultured bacterium RepID=C9DF12_9BACT
bssR; Biofilm formation regulatory protein
Biofilm formation regulatory protein BssR {ECO:0000313|EMBL:AFS75306.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L1_007_061G1_scaffold_32_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19155..20480
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
Ribosomal protein S12 methylthiotransferase RimO n=1000 Tax=Enterobacteriaceae RepID=RIMO_ECO24
rimO; ribosomal protein S12 methylthiotransferase
L1_007_061G1_scaffold_32_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20527..21855)
DNA (1329bp) protein (443aa)
Putative lipoprotein YliF n=133 Tax=Escherichia RepID=YLIF_ECOLI
yliF; diguanylate cyclase
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KDU55243.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
L1_007_061G1_scaffold_32_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21863..24211)
DNA (2349bp) protein (783aa)
Cyclic diguanylate phosphodiesterase (EAL) domain protein n=4 Tax=Escherichia coli RepID=D7XY56_ECOLX
Inner membrane protein {ECO:0000313|EMBL:ELD72040.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
yliE; inner membrane protein
L1_007_061G1_scaffold_32_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24389..25300)
DNA (912bp) protein (304aa)
Glutathione transport system permease protein GsiD n=777 Tax=Enterobacteriaceae RepID=GSID_ECO57
gsiD; glutathione transporter, permease component, ABC superfamily
Glutathione transport system permease gsiD {ECO:0000313|EMBL:ELD72039.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
L1_007_061G1_scaffold_32_29
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25303..26223)
DNA (921bp) protein (307aa)
Glutathione transport system permease protein GsiC n=949 Tax=Enterobacteriaceae RepID=GSIC_ECOK1
gsiC; glutathione ABC transporter permease GsiC
Glutathione transport system permease protein gsiC {ECO:0000313|EMBL:EIQ28943.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L1_007_061G1_scaffold_32_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26241..27779)
DNA (1539bp) protein (513aa)
Glutathione-binding protein GsiB n=4 Tax=Escherichia coli RepID=D7XY59_ECOLX
Glutathione-binding protein gsiB {ECO:0000313|EMBL:EOV64120.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
gsiB; glutathione ABC transporter periplasmic glutathione-binding protein GsiB
Displaying items 1-30 of 121 in total

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