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L1_007_061G1_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_124_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(206..1264)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JR98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66494.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
oxidoreductase, 2-nitropropane dioxygenase
L1_007_061G1_scaffold_124_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1588..2463)
DNA (876bp) protein (292aa)
33 kDa chaperonin n=3 Tax=Clostridium butyricum RepID=B1QXJ6_CLOBU
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hslO; 33 kDa chaperonin
L1_007_061G1_scaffold_124_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2490..3227)
DNA (738bp) protein (246aa)
Methyltransferase type 12 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7P3_9CLOT
Methyltransferase type 12 {ECO:0000313|EMBL:EHJ00194.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
type 11 methyltransferase
L1_007_061G1_scaffold_124_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3335..3598)
DNA (264bp) protein (88aa)
Small, acid-soluble spore protein, alpha/beta family n=4 Tax=Clostridium butyricum RepID=B1QXJ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36154.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
small, acid-soluble spore protein, alpha/beta type
L1_007_061G1_scaffold_124_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3901..4929
DNA (1029bp) protein (343aa)
asd; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSZ5_CLOSA
L1_007_061G1_scaffold_124_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5004..5882
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
dapA2; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBG8_9CLOT
L1_007_061G1_scaffold_124_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5893..6648
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018068}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018030};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDC9_CLOBU
L1_007_061G1_scaffold_124_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7181..7732
DNA (552bp) protein (184aa)
Transmembranal protein BioY n=3 Tax=Clostridium butyricum RepID=B1QZ95_CLOBU
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:KJZ86122.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L1_007_061G1_scaffold_124_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7743..8696
DNA (954bp) protein (318aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Biotin synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9Q1_9CLOT
biotin synthase
L1_007_061G1_scaffold_124_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8797..9114)
DNA (318bp) protein (106aa)
UPF0345 protein A370_01344 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6U4_9CLOT
UPF0345 protein A370_01344 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_061G1_scaffold_124_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9237..10454)
DNA (1218bp) protein (406aa)
aspartate aminotransferase n=1 Tax=Clostridium beijerinckii RepID=UPI00031BFB83
class I and II aminotransferase
Aminotransferase, class I and II {ECO:0000313|EMBL:ABR33963.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_061G1_scaffold_124_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10548..11258
DNA (711bp) protein (237aa)
dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LVU5_9CLOT
L1_007_061G1_scaffold_124_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11375..12025)
DNA (651bp) protein (217aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7Q2_9CLOT
Single-stranded DNA-binding protein {ECO:0000313|EMBL:EKQ57040.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
single-stranded DNA-binding protein
L1_007_061G1_scaffold_124_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12153..12821)
DNA (669bp) protein (223aa)
Polysaccharide deacetylase family protein n=4 Tax=Clostridium butyricum RepID=B1QSU0_CLOBU
Polysaccharide deacetylase {ECO:0000313|EMBL:EEP54546.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
polysaccharide deacetylase
L1_007_061G1_scaffold_124_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13143..13733
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSE2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43729.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_124_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13730..14614)
DNA (885bp) protein (295aa)
Cytochrome D1 heme domain containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAV0_9CLOT
Cytochrome D1 heme domain containing protein {ECO:0000313|EMBL:EKQ57043.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
cytochrome D1 heme domain containing protein
L1_007_061G1_scaffold_124_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14768..15019
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LVU9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57280.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_124_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15076..17016)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRB8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57281.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_124_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17088..18431)
DNA (1344bp) protein (448aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Folylpolyglutamate synthase FolC {ECO:0000313|EMBL:AGX43733.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AGX43733.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Folylpolyglutamate synthase FolC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT71_CLOSA
L1_007_061G1_scaffold_124_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18483..19328)
DNA (846bp) protein (282aa)
integral membrane protein TerC n=1 Tax=Clostridium beijerinckii RepID=UPI0002F68203
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ABR33954.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_061G1_scaffold_124_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19487..22129)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
valS; valine--tRNA ligase ValS (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT10_CLOSA
L1_007_061G1_scaffold_124_22
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22628..23026)
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MXS0_9CLOT
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AGF59326.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_124_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23155..24345)
DNA (1191bp) protein (397aa)
aminotransferase n=1 Tax=Clostridium beijerinckii RepID=UPI0002F088F3
class I and II aminotransferase
Aminotransferase {ECO:0000313|EMBL:ETD68266.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L1_007_061G1_scaffold_124_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24463..25338)
DNA (876bp) protein (292aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
L1_007_061G1_scaffold_124_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25880..26560)
DNA (681bp) protein (227aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9A4_9CLOT
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EHJ01971.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L1_007_061G1_scaffold_124_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26752..27159
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M023_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI98576.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L1_007_061G1_scaffold_124_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27410..27613)
DNA (204bp) protein (68aa)
Copper chaperone n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSW1_CLOSA
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AGX42522.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_124_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27631..28245)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTM6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16859.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L1_007_061G1_scaffold_124_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28489..29160
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50155.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RelA/SpoT domain-containing protein
L1_007_061G1_scaffold_124_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29226..30005)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANF5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34314.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SH3 type 3 domain protein
Displaying items 1-30 of 66 in total

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