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L1_007_061G1_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_176_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..366)
DNA (366bp) protein (122aa)
PTS system, alpha-glucoside-specific IIBC subunit (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=5 Tax=Erysipelotrichaceae RepID=B0N249_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHQ45304.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_061G1_scaffold_176_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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423..1187
DNA (765bp) protein (255aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N248_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36778.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
RpiR family transcriptional regulator
L1_007_061G1_scaffold_176_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1187..1939
DNA (753bp) protein (251aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N247_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36777.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
RpiR family transcriptional regulator
L1_007_061G1_scaffold_176_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1957..3483)
DNA (1527bp) protein (509aa)
PTS system, glucose-like IIB component n=3 Tax=Coprobacillus RepID=C3RP08_9FIRM
PTS system glucose-like IIB component {ECO:0000313|EMBL:CCZ36776.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system transporter subunit IIC
L1_007_061G1_scaffold_176_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3504..4829)
DNA (1326bp) protein (442aa)
Family 4 glycosyl hydrolase n=5 Tax=Erysipelotrichaceae RepID=B0N245_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90847.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycoside hydrolase
L1_007_061G1_scaffold_176_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5220..6176)
DNA (957bp) protein (319aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Erysipelotrichaceae RepID=B0N244_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDS19804.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative auxin efflux carrier
L1_007_061G1_scaffold_176_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6319..7503
DNA (1185bp) protein (395aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Transcription termination factor Rho n=5 Tax=Erysipelotrichaceae RepID=B0N243_9FIRM
transcription termination factor Rho
L1_007_061G1_scaffold_176_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7749..8939)
DNA (1191bp) protein (397aa)
Transporter, major facilitator family protein n=2 Tax=Erysipelotrichaceae RepID=B0N242_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDS19802.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Arabinose efflux permease
L1_007_061G1_scaffold_176_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9005..9367)
DNA (363bp) protein (121aa)
Transcriptional regulator, MerR family n=5 Tax=Erysipelotrichaceae RepID=B0N241_9FIRM
MerR-family transcriptional regulator {ECO:0000313|EMBL:CCZ36771.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
regulatory protein MerR
L1_007_061G1_scaffold_176_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9351..9656)
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N240_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36770.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_061G1_scaffold_176_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9715..10236)
DNA (522bp) protein (174aa)
Acetyltransferase, GNAT family n=3 Tax=Erysipelotrichaceae RepID=B0N239_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90853.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
acetyltransferase
L1_007_061G1_scaffold_176_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10280..10879)
DNA (600bp) protein (200aa)
R3H domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N238_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36768.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Jag protein
L1_007_061G1_scaffold_176_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10888..11784)
DNA (897bp) protein (299aa)
Membrane protein insertase, YidC/Oxa1 family n=5 Tax=Erysipelotrichaceae RepID=B0N237_9FIRM
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:CCZ36767.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
spoIIIJ; stage III sporulation protein J
L1_007_061G1_scaffold_176_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11785..12123)
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Erysipelotrichaceae RepID=B0N236_9FIRM
L1_007_061G1_scaffold_176_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(12164..12298)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=7 Tax=Erysipelotrichaceae RepID=B0N235_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpmH; 50S ribosomal protein L34
L1_007_061G1_scaffold_176_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12988..14334
DNA (1347bp) protein (449aa)
Chromosomal replication initiator protein DnaA n=5 Tax=Erysipelotrichaceae RepID=B0N234_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaA; chromosomal replication initiator protein DnaA
L1_007_061G1_scaffold_176_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14490..15599
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DNA polymerase III subunit beta n=4 Tax=Erysipelotrichaceae RepID=B0N233_9FIRM
dnaN; DNA polymerase III subunit beta
L1_007_061G1_scaffold_176_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15809..16015
DNA (207bp) protein (69aa)
S4 domain protein YaaA n=4 Tax=Erysipelotrichaceae RepID=B0N232_9FIRM
S4 domain-containing protein YaaA {ECO:0000313|EMBL:CCZ32935.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_061G1_scaffold_176_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16015..17112
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=4 Tax=Erysipelotrichaceae RepID=B0N231_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
recF; recombination protein F
L1_007_061G1_scaffold_176_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17112..19037
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DNA gyrase subunit B n=4 Tax=Erysipelotrichaceae RepID=B0N230_9FIRM
gyrB; DNA gyrase subunit B
L1_007_061G1_scaffold_176_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


19055..21514
DNA (2460bp) protein (820aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=4 Tax=Erysipelotrichaceae RepID=B0N229_9FIRM
L1_007_061G1_scaffold_176_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21568..22077
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RP27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90865.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_061G1_scaffold_176_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22103..22489)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QVW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32940.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
HAD-superfamily hydrolase
L1_007_061G1_scaffold_176_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22504..22746)
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RP29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32941.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_061G1_scaffold_176_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22743..23453)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90868.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
MerR family transcriptional regulator
L1_007_061G1_scaffold_176_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23809..25314
DNA (1506bp) protein (502aa)
Na+/H+ antiporter family protein n=4 Tax=Erysipelotrichaceae RepID=B0N223_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33039.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Na+/H+ antiporter NhaC
L1_007_061G1_scaffold_176_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25376..28318
DNA (2943bp) protein (981aa)
PAS domain S-box protein n=4 Tax=Erysipelotrichaceae RepID=B0N222_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EDS19782.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
diguanylate cyclase/phosphodiesterase
L1_007_061G1_scaffold_176_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28451..29038
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=5 Tax=Erysipelotrichaceae RepID=B0N221_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36066.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_061G1_scaffold_176_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29104..29799
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45629.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_061G1_scaffold_176_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29800..32043
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90873.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
Displaying items 1-30 of 52 in total

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