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L1_007_061G1_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_192_1
unknown

Not on your lists

3..173
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_061G1_scaffold_192_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(251..1951)
DNA (1701bp) protein (567aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKE0_CLOBU
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KHD17239.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L1_007_061G1_scaffold_192_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2042..2362)
DNA (321bp) protein (107aa)
Rhodanesen domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTQ9_CLOBO
Rhodanesen domain protein {ECO:0000313|EMBL:EES50611.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
rhodanese domain protein
L1_007_061G1_scaffold_192_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2616..3629)
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1QZR4_CLOBU
L1_007_061G1_scaffold_192_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3992..4234)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZ00_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44866.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_192_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4446..4880)
DNA (435bp) protein (145aa)
Universal stress protein UspA-like protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU01_9CLOT
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EKQ50237.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
universal stress protein domain-containing protein, UspA family
L1_007_061G1_scaffold_192_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5048..5884)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Probable endonuclease 4 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQI7_CLOBO
AP endonuclease, family 2
L1_007_061G1_scaffold_192_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6023..6925)
DNA (903bp) protein (301aa)
HD hydrolase superfamily protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V156_CLOBA
HD hydrolase superfamily protein
Phosphohydrolase {ECO:0000313|EMBL:KIL08919.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L1_007_061G1_scaffold_192_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7283..7849)
DNA (567bp) protein (189aa)
P-loop ATPase n=4 Tax=Clostridium butyricum RepID=B1QXY4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35726.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
P-loop ATPase
L1_007_061G1_scaffold_192_10
unknown

Not on your lists

8437..8616
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_061G1_scaffold_192_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8622..9578
DNA (957bp) protein (319aa)
Chemotaxis sensory transducer protein n=2 Tax=Clostridium butyricum RepID=B1QZS8_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP54116.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis protein
L1_007_061G1_scaffold_192_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9729..10283)
DNA (555bp) protein (185aa)
HTH-type transcriptional regulator YdcN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUT9_CLOSA
ydcN; HTH-type transcriptional regulator YdcN
HTH-type transcriptional regulator YdcN {ECO:0000313|EMBL:AGX44308.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_192_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10452..11393
DNA (942bp) protein (314aa)
EamA-like transporter family/multidrug resistance efflux transporter n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LX20_9CLOT
EamA-like transporter family/multidrug resistance efflux transporter
EamA-like transporter family/multidrug resistance efflux transporter {ECO:0000313|EMBL:AGF57760.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_192_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11560..13488)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97742.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
multidrug ABC transporter ATPase
L1_007_061G1_scaffold_192_15
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13475..15211)
DNA (1737bp) protein (579aa)
ABC transporter related protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMX0_9CLOT
ABC transporter
ABC transporter {ECO:0000313|EMBL:CDM70205.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_007_061G1_scaffold_192_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15331..15762)
DNA (432bp) protein (144aa)
Regulatory protein MarR n=1 Tax=Clostridium sp. DL-VIII RepID=G7M8D8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70206.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_007_061G1_scaffold_192_17
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16046..17035)
DNA (990bp) protein (330aa)
oxidoreductase n=1 Tax=Clostridium arbusti RepID=UPI000288E64D
oxidoreductase
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EMS71071.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
L1_007_061G1_scaffold_192_18
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17202..17846)
DNA (645bp) protein (215aa)
Pentapeptide repeat-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GLX8_9CLOT
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:CDB15162.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
pentapeptide repeat protein
L1_007_061G1_scaffold_192_19
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18205..19551)
DNA (1347bp) protein (449aa)
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:CDL92722.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CDL92722.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
accC1: biotin carboxylase 1 (EC:6.3.4.14 6.4.1.2)
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003742328
L1_007_061G1_scaffold_192_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19572..20018)
DNA (447bp) protein (149aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AB33_CLOBU
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ENZ33608.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
biotin/lipoyl attachment domain-containing protein
L1_007_061G1_scaffold_192_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20080..21081)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003083C5D
Uncharacterized protein {ECO:0000313|EMBL:ENZ33609.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
kipA; KipI antagonist
L1_007_061G1_scaffold_192_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21078..21785)
DNA (708bp) protein (236aa)
UPI0003D60C3B related cluster n=1 Tax=unknown RepID=UPI0003D60C3B
Kinase inhibitor {ECO:0000313|EMBL:KHD15979.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
kipI; kinase A inhibitor
L1_007_061G1_scaffold_192_23

Not on your lists

comp(21805..22929)
DNA (1125bp) protein (375aa)
Alanine racemase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z112_CLOBU
Alanine racemase 2 {ECO:0000313|EMBL:ETJ37232.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
alanine racemase
L1_007_061G1_scaffold_192_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22952..23710)
DNA (759bp) protein (253aa)
UPF0271 protein Cbei_2759 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=Y2759_CLOB8
UPF0271 protein LF65_02716 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
LamB/YcsF family protein
L1_007_061G1_scaffold_192_25
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23812..24597)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI000318BB04
UPF0317 protein CTDIVETGP_2786 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein
L1_007_061G1_scaffold_192_26
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24613..25725)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00036F269C
Uncharacterized protein {ECO:0000313|EMBL:CDL92715.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein
L1_007_061G1_scaffold_192_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25842..26696)
DNA (855bp) protein (285aa)
dat; D-alanine aminotransferase Dat (EC:2.6.1.21)
D-amino-acid transaminase {ECO:0000313|EMBL:EHI97482.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EHI97482.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
D-amino-acid transaminase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBF5_9CLOT
L1_007_061G1_scaffold_192_28
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26939..27364)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002DABAD2
Regulatory proteins, AsnC/Lrp {ECO:0000313|EMBL:CDL92713.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
transcriptional regulator
L1_007_061G1_scaffold_192_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27411..28229)
DNA (819bp) protein (273aa)
NLP/P60 protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M385_9CLOT
NLP/P60 protein {ECO:0000313|EMBL:EHJ00046.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
NLP/P60 protein
L1_007_061G1_scaffold_192_30
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28255..29229)
DNA (975bp) protein (325aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0003039366
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGR78690.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
amiF; oligopeptide ABC transporter ATPase
Displaying items 1-30 of 44 in total

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