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L1_007_061G1_scaffold_203

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_203_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156..1193
DNA (1038bp) protein (346aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G5Z6_BIFLO
alpha/beta fold family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:AAN24668.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_203_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1329..2753)
DNA (1425bp) protein (475aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
NAD(P) transhydrogenase subunit beta n=12 Tax=Bifidobacterium RepID=B3DSB6_BIFLD
pntB; pntb
L1_007_061G1_scaffold_203_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2753..3058)
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha-2 subunit n=15 Tax=Bifidobacterium RepID=B7GS77_BIFLS
NAD(P) transhydrogenase alpha-2 subunit
NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:BAP83473.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_203_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3074..4237)
DNA (1164bp) protein (388aa)
NAD/NADP transhydrogenase alpha subunit n=13 Tax=Bifidobacterium RepID=D6D8U6_BIFLN
NAD(P) transhydrogenase alpha-1 subunit
Alanine dehydrogenase/pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:EIJ28441.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_061G1_scaffold_203_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4656..6689
DNA (2034bp) protein (678aa)
Long-chain acyl-CoA synthetase n=3 Tax=Bifidobacterium longum RepID=B3DSB9_BIFLD
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ACD98038.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
long-chain-fatty-acid-CoA ligase
L1_007_061G1_scaffold_203_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6742..7806)
DNA (1065bp) protein (355aa)
GTPase Era n=11 Tax=Bifidobacterium longum RepID=B3DSC0_BIFLD
era; era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_203_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7808..9241)
DNA (1434bp) protein (478aa)
Hemolysin-like protein n=13 Tax=Bifidobacterium longum RepID=B3DSC1_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43705.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_203_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9317..9865)
DNA (549bp) protein (183aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Endoribonuclease YbeY n=17 Tax=Bifidobacterium RepID=YBEY_BIFLD
hypothetical protein
L1_007_061G1_scaffold_203_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9855..10976)
DNA (1122bp) protein (374aa)
Phosphate starvation-inducible protein n=15 Tax=Bifidobacterium RepID=B3DSC3_BIFLD
phosphate starvation-inducible protein
PhoH family protein {ECO:0000313|EMBL:EIJ24478.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_203_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11049..11387)
DNA (339bp) protein (113aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=10 Tax=Bifidobacterium RepID=D6D8V0_BIFLN
hit2; hit2
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADH00353.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_061G1_scaffold_203_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11436..12233)
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribosomal RNA small subunit methyltransferase E n=17 Tax=Bifidobacterium RepID=B3DSC5_BIFLD
hypothetical protein
L1_007_061G1_scaffold_203_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12477..13355
DNA (879bp) protein (293aa)
rRNA methylase n=11 Tax=Bifidobacterium RepID=B3DSC6_BIFLD
rRNA methyltransferase
SpoU rRNA methylase {ECO:0000313|EMBL:EFV37736.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_061G1_scaffold_203_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13556..14800
DNA (1245bp) protein (415aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXB1_9BIFI
glucose-1-phosphate adenylyltransferase
L1_007_061G1_scaffold_203_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14890..15483)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GTJ3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY22124.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
FeS assembly SUF system domain protein
L1_007_061G1_scaffold_203_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15490..16044)
DNA (555bp) protein (185aa)
Uncharacterized protein n=19 Tax=Bifidobacterium RepID=B3DSC9_BIFLD
hypothetical protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KEY32844.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_061G1_scaffold_203_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16056..17330)
DNA (1275bp) protein (425aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Cysteine desulfurase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTJ5_BIFLN
cysteine desulfurase
L1_007_061G1_scaffold_203_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17469..18248)
DNA (780bp) protein (260aa)
ABC-type transport system for Fe-S cluster assembly ATPase component n=16 Tax=Bifidobacterium RepID=B3DSD1_BIFLD
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI97668.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_061G1_scaffold_203_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18274..19509)
DNA (1236bp) protein (412aa)
ABC-type transport system for Fe-S cluster assembly permease component n=14 Tax=Bifidobacterium RepID=B3DSD2_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43694.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_203_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19515..21014)
DNA (1500bp) protein (500aa)
ABC-type transport system for Fe-S cluster assembly permease component n=14 Tax=Bifidobacterium RepID=B3DSD3_BIFLD
Fe-S cluster assembly protein SufB
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ66417.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_203_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21238..22833)
DNA (1596bp) protein (532aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT31_BIFL1
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70925.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
hypothetical protein
L1_007_061G1_scaffold_203_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23080..24741)
DNA (1662bp) protein (554aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
CTP synthase n=17 Tax=Bifidobacterium RepID=PYRG_BIFLO
pyrG; pyrg
L1_007_061G1_scaffold_203_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24887..25462)
DNA (576bp) protein (192aa)
Peptidase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQT0_BIFLN
peptidase
Peptidase {ECO:0000313|EMBL:BAP83454.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_203_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25474..25713
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83453.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_203_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25772..26218)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
3-dehydroquinate dehydratase n=15 Tax=Bifidobacterium RepID=B3DSD7_BIFLD
3-dehydroquinate dehydratase
L1_007_061G1_scaffold_203_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26382..28004)
DNA (1623bp) protein (541aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:CCK34864.1}; EC=4.2.3.4 {ECO:0000313|EMBL:CCK34864.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
3-dehydroquinate synthase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0L4_BIFLN
shikimate kinase
L1_007_061G1_scaffold_203_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28087..29274)
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Chorismate synthase n=14 Tax=Bifidobacterium RepID=AROC_BIFLD
chorismate synthase
L1_007_061G1_scaffold_203_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29338..29805
DNA (468bp) protein (156aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GTK5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95926.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_203_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29873..31054)
DNA (1182bp) protein (394aa)
YceG family protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAN6_BIFLI
YceG family protein {ECO:0000313|EMBL:EEQ55080.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_061G1_scaffold_203_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31065..31523)
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Putative Holliday junction resolvase n=8 Tax=Bifidobacterium RepID=RUVX_BIFLD
endonuclease for recombination
L1_007_061G1_scaffold_203_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31532..34213)
DNA (2682bp) protein (894aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine--tRNA ligase n=11 Tax=Bifidobacterium RepID=SYA_BIFLO
alanyl-tRNA synthase
Displaying items 1-30 of 41 in total

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