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L1_007_061G1_scaffold_289

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_289_1
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..157
DNA (156bp) protein (52aa)
Major outer membrane lipoprotein n=1433 Tax=Enterobacteriaceae RepID=LPP_ECO57
lpp; murein lipoprotein
Major outer membrane lipoprotein {ECO:0000313|EMBL:CCK02328.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 701.;"
L1_007_061G1_scaffold_289_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(221..1225)
DNA (1005bp) protein (335aa)
LysM domain/ErfK/YbiS/YcfS/YnhG family protein n=276 Tax=Escherichia coli RepID=B2N1T5_ECOLX
ynhG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ29274.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
L1_007_061G1_scaffold_289_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1374..1790)
DNA (417bp) protein (139aa)
Cysteine desulfuration protein SufE n=3 Tax=Escherichia coli RepID=D7Y2R3_ECOLX
Cysteine desulfuration protein SufE {ECO:0000256|HAMAP-Rule:MF_01832, ECO:0000256|SAAS:SAAS00009949}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
sufE; cysteine desufuration protein SufE
L1_007_061G1_scaffold_289_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1803..3023)
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506};; Selenocysteine beta-lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine reductase {ECO:0000256|HAMAP-Rule:MF_01831}; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C1.;"
Cysteine desulfurase n=109 Tax=Escherichia RepID=SUFS_ECOBW
SufS subfamily cysteine desulfurase
L1_007_061G1_scaffold_289_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3020..4291)
DNA (1272bp) protein (424aa)
FeS assembly protein SufD n=3 Tax=Escherichia coli RepID=D7Y2R5_ECOLX
FeS cluster assembly protein sufD {ECO:0000313|EMBL:EOW06886.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
sufD; cysteine desulfurase activator complex subunit SufD
L1_007_061G1_scaffold_289_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4266..5012)
DNA (747bp) protein (249aa)
FeS assembly ATPase SufC n=10 Tax=Escherichia coli RepID=D7Y2R6_ECOLX
FeS assembly ATPase SufC {ECO:0000313|EMBL:EOW06887.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
sufC; cysteine desulfurase
L1_007_061G1_scaffold_289_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5022..6509)
DNA (1488bp) protein (496aa)
FeS cluster assembly protein SufB n=414 Tax=Enterobacteriaceae RepID=SUFB_ECOLI
sufB; feS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:EIG94931.1}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
L1_007_061G1_scaffold_289_8
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6518..6886)
DNA (369bp) protein (123aa)
SufA n=1 Tax=Escherichia coli E101 RepID=H1E1Y1_ECOLX
FeS assembly scaffold SufA {ECO:0000313|EMBL:EIQ30160.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
sufA; iron-sulfur cluster assembly scaffold protein
L1_007_061G1_scaffold_289_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7434..7622)
DNA (189bp) protein (63aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D7XNJ2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:END91983.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L1_007_061G1_scaffold_289_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7722..8132)
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioesterase {ECO:0000256|HAMAP-Rule:MF_01936}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
Uncharacterized protein n=6 Tax=Escherichia coli RepID=D7Y2S0_ECOLX
hypothetical protein
L1_007_061G1_scaffold_289_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8129..11185)
DNA (3057bp) protein (1019aa)
FAD linked oxidase, C-terminal domain protein n=3 Tax=Escherichia coli RepID=D7Y2S1_ECOLX
FAD linked oxidase, C-terminal domain protein {ECO:0000313|EMBL:EFJ98058.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
putative FAD-binding oxidase
L1_007_061G1_scaffold_289_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11574..12686
DNA (1113bp) protein (371aa)
UPF0118 inner membrane protein YdiK n=662 Tax=Enterobacteriaceae RepID=YDIK_ECOLI
ydiK; inner membrane protein YdiK
Uncharacterized protein {ECO:0000313|EMBL:EMV60770.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L1_007_061G1_scaffold_289_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13115..13471
DNA (357bp) protein (119aa)
Uncharacterized protein YdiL n=292 Tax=Enterobacteriaceae RepID=YDIL_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN98797.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L1_007_061G1_scaffold_289_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13571..14785
DNA (1215bp) protein (405aa)
Transporter, major facilitator family protein n=3 Tax=Escherichia coli RepID=D7Y2S4_ECOLX
Inner membrane transporter ydiM {ECO:0000313|EMBL:EOW06895.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ydiM; major facilitator family transporter
L1_007_061G1_scaffold_289_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15012..16277
DNA (1266bp) protein (422aa)
Transporter, major facilitator family protein n=3 Tax=Escherichia coli RepID=D7Y2S5_ECOLX
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFJ98062.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
ydiN; predicted transporter
L1_007_061G1_scaffold_289_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16289..17155
DNA (867bp) protein (289aa)
quinate/shikimate dehydrogenase (EC:1.1.1.282)
Quinate/shikimate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; EC=1.1.1.282 {ECO:0000256|HAMAP-Rule:MF_01578};; NAD-dependent shikimate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Quinate/shikimate dehydrogenase n=396 Tax=Enterobacteriaceae RepID=YDIB_ECO81
L1_007_061G1_scaffold_289_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17186..17944
DNA (759bp) protein (253aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
3-dehydroquinate dehydratase n=3 Tax=Escherichia coli RepID=D7Y2S7_ECOLX
3-dehydroquinate dehydratase
L1_007_061G1_scaffold_289_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18090..19685
DNA (1596bp) protein (532aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Acetate CoA-transferase YdiF n=3 Tax=Escherichia coli RepID=D7Y2S8_ECOLX
hypothetical protein
L1_007_061G1_scaffold_289_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19699..20850
DNA (1152bp) protein (384aa)
Probable acyl-CoA dehydrogenase YdiO n=1151 Tax=Enterobacteriaceae RepID=YDIO_ECO57
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EHU14990.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L1_007_061G1_scaffold_289_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20895..21806)
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family n=3 Tax=Escherichia coli RepID=D7Y2T0_ECOLX
Transcriptional regulator YdiP {ECO:0000313|EMBL:EOW06901.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ydiP; DNA-binding transcriptional regulator
L1_007_061G1_scaffold_289_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21909..22085)
DNA (177bp) protein (59aa)
Uncharacterized protein n=966 Tax=Enterobacteriaceae RepID=A7ZMG2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZK23065.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L1_007_061G1_scaffold_289_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22122..22886
DNA (765bp) protein (255aa)
Electron transfer flavoprotein domain protein n=4 Tax=Escherichia coli RepID=D7Y2T2_ECOLX
Electron transfer flavoprotein YdiQ {ECO:0000313|EMBL:EOV62394.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
ydiQ; Electron transfer flavoprotein, beta subunit
L1_007_061G1_scaffold_289_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22906..23844
DNA (939bp) protein (313aa)
Electron transfer flavoprotein FAD-binding domain protein n=46 Tax=Escherichia coli RepID=D7Y2T3_ECOLX
Electron transfer flavodomain protein {ECO:0000313|EMBL:EMX86055.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
ydiR; electron transfer flavoprotein subunit YdiR
L1_007_061G1_scaffold_289_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23900..25189
DNA (1290bp) protein (430aa)
FAD dependent oxidoreductase n=3 Tax=Escherichia coli RepID=D7Y2T4_ECOLX
Electron transfer flavoprotein-quinone oxidoreductase {ECO:0000313|EMBL:EOV62396.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
ydiS; hypothetical protein
L1_007_061G1_scaffold_289_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25186..25479
DNA (294bp) protein (98aa)
Ferredoxin-like protein YdiT n=126 Tax=Enterobacteriaceae RepID=YDIT_ECOLI
ydiT; putative 4Fe-4S ferredoxin-type protein
Ferredoxin {ECO:0000313|EMBL:AJB51819.1}; Putative 3Fe-4S ferredoxin-type protein {ECO:0000313|EMBL:AKF55571.1}; Putative ferrodoxin {ECO:0000313|EMBL:CEE05447.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_007_061G1_scaffold_289_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25536..27182
DNA (1647bp) protein (549aa)
Short chain acyl-CoA synthetase {ECO:0000313|EMBL:KHI97829.1}; Short chain acyl-CoA synthetase, anaerobic {ECO:0000313|EMBL:CCQ28919.2}; EC=6.2.1.3 {ECO:0000313|EMBL:CCQ28919.2};; Short-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDP71264.1}; EC=6.2.1.- {ECO:0000313|EMBL:CDP71264.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Short chain acyl-CoA synthetase, anaerobic n=77 Tax=Enterobacteriaceae RepID=B7L6H4_ECO55
short chain acyl-CoA synthetase
L1_007_061G1_scaffold_289_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27239..29617)
DNA (2379bp) protein (793aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Phosphoenolpyruvate synthase n=440 Tax=Enterobacteriaceae RepID=PPSA_ECOLI
L1_007_061G1_scaffold_289_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29950..30783
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Phosphoenolpyruvate synthase regulatory protein n=1208 Tax=Enterobacteriaceae RepID=PSRP_ECO24
hypothetical protein
L1_007_061G1_scaffold_289_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30940..31986
DNA (1047bp) protein (349aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive n=625 Tax=Enterobacteriaceae RepID=AROH_ECOL6
L1_007_061G1_scaffold_289_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32118..32309
DNA (192bp) protein (64aa)
Uncharacterized protein YdiE n=756 Tax=Enterobacteriaceae RepID=YDIE_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW17692.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Displaying items 1-30 of 37 in total

View Taxonomy