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L1_007_061G1_scaffold_358

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_358_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..346)
DNA (345bp) protein (115aa)
Permease protein of ABC transporter system n=7 Tax=Bifidobacterium bifidum RepID=E3EQG5_BIFBS
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ADG99885.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_061G1_scaffold_358_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

610..813
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CJF1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI84665.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_061G1_scaffold_358_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(985..3006)
DNA (2022bp) protein (674aa)
nagZ; Beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ABE96227.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ABE96227.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Beta-N-acetylhexosaminidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW8_BIFBU
L1_007_061G1_scaffold_358_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3099..3257
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000364FB54
Uncharacterized protein {ECO:0000313|EMBL:ERI84662.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_358_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3254..4429)
DNA (1176bp) protein (392aa)
NagC/XylR-type transciptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW7_BIFBU
NagC/XylR-type transciptional regulator
NagC/XylR-type transciptional regulator {ECO:0000313|EMBL:ABE96226.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4816..5985
DNA (1170bp) protein (390aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CJE6_BIFBR
Solute-binding protein of ABC transporter system (lactose)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI84660.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_358_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6162..6410
DNA (249bp) protein (83aa)
ISMsm8, transposase n=2 Tax=Bifidobacterium breve RepID=H3L1W6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75882.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Transposase
L1_007_061G1_scaffold_358_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6491..7501
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium breve RepID=F9XXW5_BIFBU
Transcriptional regulator, LacI family
Uncharacterized protein {ECO:0000313|EMBL:EPD75881.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_358_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7701..10838)
DNA (3138bp) protein (1046aa)
lacZ6; Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Beta-galactosidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW4_BIFBU
L1_007_061G1_scaffold_358_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11204..12685
DNA (1482bp) protein (494aa)
Galactoside symporter n=2 Tax=Bifidobacterium breve RepID=F9XXW3_BIFBU
lacS; Galactoside symporter
Galactoside symporter {ECO:0000313|EMBL:AHJ21744.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_358_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13186..13449
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C730_BIFBA
site-specific recombinase, phage integrase domain protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27883.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_358_12
unknown

Not on your lists

comp(13324..13581)
DNA (258bp) protein (86aa)
hypothetical protein
L1_007_061G1_scaffold_358_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13856..15220
DNA (1365bp) protein (455aa)
Integrase protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW1_BIFBU
Integrase protein
Integrase protein {ECO:0000313|EMBL:ABE96219.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15345..16010
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHH6_BIFBR
Nucleotidyltransferase domain-containing protein {ECO:0000313|EMBL:KFI63076.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
putative nucleotidyltransferase domain protein
L1_007_061G1_scaffold_358_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16574..17182
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C729_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28129.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_358_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17275..18849
DNA (1575bp) protein (525aa)
Chromosome partitioning protein parB n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXV9_BIFBU
parB1; Chromosome partitioning protein parB
Chromosome partitioning protein parB {ECO:0000313|EMBL:ABE96217.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18934..19260)
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C6V2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75873.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_358_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19294..19662)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3A109_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ80228.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19955..20359
DNA (405bp) protein (135aa)
Bacterial mobilization protein MobC n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6V0_BIFBA
mobilization protein
Bacterial mobilization protein MobC {ECO:0000313|EMBL:AEF26374.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_358_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20350..21780
DNA (1431bp) protein (477aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6U9_BIFBA
Relaxase
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:AEF27673.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_358_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21849..22718
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXV4_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96214.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22746..23750
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGI7_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75868.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_358_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23753..24901
DNA (1149bp) protein (383aa)
antirestriction protein n=1 Tax=Bifidobacterium breve RepID=UPI00030371E6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96210.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24891..25211
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXU9_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96209.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_358_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25208..25588
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6U2_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27604.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_358_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25585..27249
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHM4_BIFBR
TraG/TraD family
Uncharacterized protein {ECO:0000313|EMBL:EPD75864.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_358_27
unknown

Not on your lists

comp(27253..28632)
DNA (1380bp) protein (460aa)
hypothetical protein
L1_007_061G1_scaffold_358_28
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(28704..30110)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002DC83D4
DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
L1_007_061G1_scaffold_358_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30890..31738)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHG2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75861.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying 29 items

View Taxonomy