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L1_007_061G1_scaffold_381

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_381_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..268
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A276_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE90119.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_061G1_scaffold_381_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

790..2280
DNA (1491bp) protein (497aa)
G5 domain protein n=2 Tax=Bifidobacterium breve RepID=F6C974_BIFBA
hypothetical secreted protein with G5 and DUF348 domains
G5 domain protein {ECO:0000313|EMBL:AEF27748.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_381_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2301..3230
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribosomal RNA small subunit methyltransferase A n=4 Tax=Bifidobacterium breve RepID=F9XZZ2_BIFBU
Dimethyladenosine transferase
L1_007_061G1_scaffold_381_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3227..4174
DNA (948bp) protein (316aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2A7_BIFBR
L1_007_061G1_scaffold_381_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4220..4849
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C977_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ22084.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_381_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4978..6396)
DNA (1419bp) protein (473aa)
tRNA adenylyltransferase (EC:2.7.7.72)
tRNA adenylyltransferase {ECO:0000313|EMBL:AEF28080.1}; EC=2.7.7.72 {ECO:0000313|EMBL:AEF28080.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
tRNA adenylyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C978_BIFBA
L1_007_061G1_scaffold_381_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6483..7469
DNA (987bp) protein (329aa)
Phosphohydrolase (MutT/nudix family protein) n=3 Tax=Bifidobacterium breve RepID=F9XZZ6_BIFBU
Phosphohydrolase (MutT/nudix family protein)
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:AHJ20252.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_061G1_scaffold_381_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7427..9619
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0003676683
putative secreted protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE96578.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_381_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9616..13395
DNA (3780bp) protein (1260aa)
Conserved hypothetical membrane spanning protein with virulence factor mviN domain n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZZ8_BIFBU
Conserved hypothetical membrane spanning protein with virulence factor mviN domain {ECO:0000313|EMBL:ABE96579.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Conserved hypothetical membrane spanning protein with virulence factor mviN domain
L1_007_061G1_scaffold_381_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13597..14616
DNA (1020bp) protein (340aa)
trxB2; Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXX1_BIFBR
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:ERI86547.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_381_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14733..15998)
DNA (1266bp) protein (422aa)
ParB-like protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CR44_BIFBR
parB2; Chromosome partitioning protein parB
ParB-like protein {ECO:0000313|EMBL:ERI86548.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_381_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15998..16966)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHS7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76298.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
parA3; Chromosome partitioning protein parA
L1_007_061G1_scaffold_381_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17219..17884)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribosomal RNA small subunit methyltransferase G n=5 Tax=Bifidobacterium breve RepID=F6C985_BIFBA
Methyltransferase gidB (Glucose inhibited division protein B)
L1_007_061G1_scaffold_381_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18008..18544)
DNA (537bp) protein (179aa)
Jag protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0F5_BIFBU
Jag protein
Jag protein {ECO:0000313|EMBL:ABE96584.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_381_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18667..19677)
DNA (1011bp) protein (337aa)
Inner membrane protein (Preprotein translocase subunit YidC) n=4 Tax=Bifidobacterium breve RepID=F9Y0F6_BIFBU
Inner membrane protein (Preprotein translocase subunit YidC)
Inner membrane protein (Preprotein translocase subunit YidC) {ECO:0000313|EMBL:AHJ22094.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_381_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19995..20345)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ribonuclease P n=1 Tax=Bifidobacterium breve RepID=UPI000192F0A1
Ribonuclease P protein component
L1_007_061G1_scaffold_381_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20377..20511)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=5 Tax=Bifidobacterium breve RepID=F6C989_BIFBA
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_381_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20830..22296
DNA (1467bp) protein (489aa)
Chromosomal replication initiator protein DnaA n=6 Tax=Bifidobacterium breve RepID=F6C5B2_BIFBA
Chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_381_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22872..23996
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DNA polymerase III subunit beta n=5 Tax=Bifidobacterium breve RepID=F6C5B3_BIFBA
DNA polymerase III, beta chain
L1_007_061G1_scaffold_381_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24072..25178
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZC4_BIFBU
DNA replication and repair protein recF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_381_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25175..25645
DNA (471bp) protein (157aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C5B5_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20266.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_381_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25780..27918
DNA (2139bp) protein (713aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA gyrase subunit B n=4 Tax=Bifidobacterium RepID=D4BLF5_BIFBR
DNA gyrase subunit B
L1_007_061G1_scaffold_381_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28093..30039
DNA (1947bp) protein (649aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
DNA gyrase subunit A n=2 Tax=Bifidobacterium breve RepID=S3AIZ3_BIFBR
DNA gyrase subunit A
L1_007_061G1_scaffold_381_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30039..30695
DNA (657bp) protein (219aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA gyrase subunit A n=4 Tax=Bifidobacterium breve RepID=F6C5B7_BIFBA
gyrA suspected. See adjacent gene [L1_007_061G1_scaffold_381_23].
DNA gyrase subunit A
L1_007_061G1_scaffold_381_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30764..31315
DNA (552bp) protein (184aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C5B8_BIFBA
Conserved hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26532.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_381_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31390..32403)
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZC9_BIFBU
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABE94725.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_381_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32672..32959)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E2M8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86566.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_061G1_scaffold_381_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33416..36547
DNA (3132bp) protein (1044aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Beta galactosidase small chain n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5C1_BIFBA
glycosyl hydrolase family 2, TIM barrel domain protein
L1_007_061G1_scaffold_381_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36980..38329
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2C9_BIFBR
putative membrane spanning protein, VanZ family
Putative membrane spanning protein, VanZ family {ECO:0000313|EMBL:AHJ18357.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_061G1_scaffold_381_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38613..39959)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase n=1 Tax=Bifidobacterium breve RepID=UPI0002EAB531
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
NADP-specific glutamate dehydrogenase
Displaying items 1-30 of 35 in total

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