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L1_007_061G1_scaffold_383

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_383_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW64_BIFLJ
Solute-binding protein of ABC transporter system for sugars
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AEF27303.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_383_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(602..742)
DNA (141bp) protein (47aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=I3B6D6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEQ55271.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_061G1_scaffold_383_3
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1252..2538)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Serine--tRNA ligase n=2 Tax=Bifidobacterium RepID=SYS_BIFLD
serS; seryl-tRNA synthetase
L1_007_061G1_scaffold_383_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2772..3953
DNA (1182bp) protein (394aa)
Sphingosine kinase n=9 Tax=Bifidobacterium RepID=B3DQG6_BIFLD
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KEY21478.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
kinase
L1_007_061G1_scaffold_383_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3958..4818)
DNA (861bp) protein (287aa)
Transcriptional antiterminator, BglG family n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DC22_BIFLN
PRD domain protein {ECO:0000313|EMBL:EEQ55267.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
transcription antiterminator BglG
L1_007_061G1_scaffold_383_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4815..7163)
DNA (2349bp) protein (783aa)
PtsG n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3X0_BIFLO
PtsG {ECO:0000313|EMBL:AAN25420.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
ptsG; hypothetical protein
L1_007_061G1_scaffold_383_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7662..9212
DNA (1551bp) protein (517aa)
Sugar transport protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8ASI5_BIFLN
sugar transport protein
Putative metabolite transport protein CsbC {ECO:0000313|EMBL:CCK35623.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_061G1_scaffold_383_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9300..10976
DNA (1677bp) protein (559aa)
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:CBK70045.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CBK70045.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=6 Tax=Bifidobacterium RepID=D6DC24_BIFLN
phosphoglucomutase
L1_007_061G1_scaffold_383_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11706..12803)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5EB68_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ27273.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_383_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13034..13456
DNA (423bp) protein (141aa)
Transcriptional regulator, BadM/Rrf2 family n=15 Tax=Bifidobacterium RepID=D6DC26_BIFLN
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CCY94959.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_383_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13590..15224
DNA (1635bp) protein (545aa)
Possible class I pyridine nucleotide-disulfideoxidoreductase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3X6_BIFLO
Possible class I pyridine nucleotide-disulfideoxidoreductase {ECO:0000313|EMBL:AAN25414.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
class I pyridine nucleotide-disulfideoxidoreductase
L1_007_061G1_scaffold_383_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15383..15679)
DNA (297bp) protein (99aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=I3B6Z2_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71842.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_061G1_scaffold_383_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15911..16783
DNA (873bp) protein (291aa)
Ribonuclease H n=2 Tax=Bifidobacterium longum RepID=E8MF29_BIFL2
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:BAJ67306.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_383_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16914..17612
DNA (699bp) protein (233aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Ribose-5-phosphate isomerase A n=13 Tax=Bifidobacterium RepID=RPIA_BIFLO
rpiA; rpia
L1_007_061G1_scaffold_383_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17765..17854)
DNA (90bp) protein (30aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DQF6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI95902.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L1_007_061G1_scaffold_383_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18046..18678)
DNA (633bp) protein (211aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=V6Y0A1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI80945.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_061G1_scaffold_383_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18806..20344
DNA (1539bp) protein (513aa)
DNA repair protein n=10 Tax=Bifidobacterium RepID=E8MF32_BIFL2
DNA repair protein
DNA repair protein RadA {ECO:0000313|EMBL:CCK35631.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_061G1_scaffold_383_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20359..21483)
DNA (1125bp) protein (375aa)
RiBF n=9 Tax=Bifidobacterium RepID=E4R3C2_BIFLM
riboflavin kinase
FAD synthase {ECO:0000313|EMBL:KEY21465.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_061G1_scaffold_383_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21581..22744)
DNA (1164bp) protein (388aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
tRNA pseudouridine synthase B n=3 Tax=Bifidobacterium RepID=TRUB_BIFLO
truB; tRNA pseudouridine synthase B
L1_007_061G1_scaffold_383_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22746..23219)
DNA (474bp) protein (158aa)
Ribosome-binding factor A n=16 Tax=Bifidobacterium RepID=RBFA_BIFLD
ribosome-binding factor
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_061G1_scaffold_383_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23370..26285)
DNA (2916bp) protein (972aa)
Translation initiation factor IF-2 n=10 Tax=Bifidobacterium RepID=IF2_BIFLD
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
translation initiation factor IF-2
L1_007_061G1_scaffold_383_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26555..27622)
DNA (1068bp) protein (356aa)
NusA antitermination factor n=6 Tax=Bifidobacterium RepID=D6ZW93_BIFLJ
nusA; NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_061G1_scaffold_383_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27851..28558
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=V6XYC6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP84245.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_383_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28599..29642)
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6DC36_BIFLN
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBK70057.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying 24 items

View Taxonomy