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L1_007_061G1_scaffold_397

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_397_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(795..2126)
DNA (1332bp) protein (444aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M0K6_9CLOT
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AGF59110.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_397_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2296..3156
DNA (861bp) protein (287aa)
bglA2; beta-glucanase BglA (EC:3.2.1.73)
UPI0003D5F17E related cluster n=1 Tax=unknown RepID=UPI0003D5F17E
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:KHD15410.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L1_007_061G1_scaffold_397_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3267..4166
DNA (900bp) protein (300aa)
Predicted alcohol dehydrogenase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) PF3_CLOLD">RepID=D8GPF3_CLOLD
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KIE44594.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
alcohol dehydrogenase
L1_007_061G1_scaffold_397_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4269..5600)
DNA (1332bp) protein (444aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1QVX9_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system lactose/cellobiose family transporter subunit IIC
L1_007_061G1_scaffold_397_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5785..6090)
DNA (306bp) protein (102aa)
phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
Phosphotransferase system cellobiose-specific component IIB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T704_9CLOT
Phosphotransferase system cellobiose-specific component IIB {ECO:0000313|EMBL:EKQ55548.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_061G1_scaffold_397_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6169..6489)
DNA (321bp) protein (107aa)
phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system cellobiose-specific component IIA {ECO:0000313|EMBL:AGF59113.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AGF59113.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Phosphotransferase system cellobiose-specific component IIA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSJ3_9CLOT
L1_007_061G1_scaffold_397_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6839..9505
DNA (2667bp) protein (889aa)
UPI0003D645C5 related cluster n=1 Tax=unknown RepID=UPI0003D645C5
Transcriptional regulatory protein LevR {ECO:0000313|EMBL:ETI90791.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
sigma-54 factor interaction domain-containing protein
L1_007_061G1_scaffold_397_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9573..10295
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATT8_CLOBU
Transcriptional regulator {ECO:0000313|EMBL:KHD15394.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transcriptional regulator, RpiR family
L1_007_061G1_scaffold_397_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10656..12083)
DNA (1428bp) protein (476aa)
bglA1; 6-phospho-beta-glucosidase BglA (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6E7_CLOBU
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:ENZ35451.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L1_007_061G1_scaffold_397_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12136..12387)
DNA (252bp) protein (84aa)
Uncharacterized conserved protein n=5 Tax=Streptococcus anginosus RepID=S6AZB2_STRAP
Membrane protein {ECO:0000313|EMBL:KHD15376.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
membrane protein
L1_007_061G1_scaffold_397_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12408..12749)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVW4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52865.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L1_007_061G1_scaffold_397_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12750..13121)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVW3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52699.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L1_007_061G1_scaffold_397_13
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13554..15713)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZDU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15202.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
surface protein PspC
L1_007_061G1_scaffold_397_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16158..17570)
DNA (1413bp) protein (471aa)
Beta-glucosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6V8_CLOBU
Beta-glucosidase {ECO:0000313|EMBL:ENZ35440.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycoside hydrolase
L1_007_061G1_scaffold_397_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17819..18127)
DNA (309bp) protein (103aa)
PTS system, lactose/cellobiose family IIB component n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6X1_CLOBU
Lichenan-specific phosphotransferase enzyme iib component {ECO:0000313|EMBL:ETI90799.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L1_007_061G1_scaffold_397_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18519..19877)
DNA (1359bp) protein (453aa)
alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase (EC:3.2.1.86)
Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase {ECO:0000313|EMBL:AGF59119.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AGF59119.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMI8_9CLOT
L1_007_061G1_scaffold_397_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20222..21160)
DNA (939bp) protein (313aa)
Phosphate binding protein n=2 Tax=Clostridium butyricum RepID=M8J8Z5_CLOBU
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS {ECO:0000313|EMBL:KJZ82991.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pstS; phosphate-binding protein PstS 1
L1_007_061G1_scaffold_397_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21493..22800)
DNA (1308bp) protein (436aa)
Lichenan permease iic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5F6_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system lactose/cellobiose family IIC subunit
L1_007_061G1_scaffold_397_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23074..23382)
DNA (309bp) protein (103aa)
celA5; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iib component n=4 Tax=Clostridium butyricum RepID=B1QTF4_CLOBU
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:ENZ30263.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L1_007_061G1_scaffold_397_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23465..23785)
DNA (321bp) protein (107aa)
PTS mannose transporter subunit IIA n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQG6_CLOPA
phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit
PTS mannose transporter subunit IIA {ECO:0000313|EMBL:ETD66529.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L1_007_061G1_scaffold_397_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24045..24344)
DNA (300bp) protein (100aa)
phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
Phosphotransferase system cellobiose-specific component IIB {ECO:0000313|EMBL:AGF58668.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AGF58668.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Phosphotransferase system cellobiose-specific component IIB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MR79_9CLOT
L1_007_061G1_scaffold_397_22
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24376..27063)
DNA (2688bp) protein (896aa)
hypothetical protein n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI00034D8731
transcriptional antiterminator
Transcriptional antiterminator {ECO:0000313|EMBL:AGF58670.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_397_23
unknown

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comp(27353..27490)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_007_061G1_scaffold_397_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27605..28549)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARP1_CLOBU
Choline permease LicB {ECO:0000313|EMBL:KJZ85085.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
permease of the drug/metabolite transporter (DMT) superfamily
L1_007_061G1_scaffold_397_25
unknown

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comp(28711..28935)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 25 items

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