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L1_007_061G1_scaffold_398

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_398_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(234..1148)
DNA (915bp) protein (305aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
metA; homoserine O-succinyltransferase MetA (EC:2.3.1.46)
UPI0003D64A78 related cluster n=1 Tax=unknown RepID=UPI0003D64A78
L1_007_061G1_scaffold_398_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1520..2578
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LSX8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33458.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_061G1_scaffold_398_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2598..3710)
DNA (1113bp) protein (371aa)
Putative domain HDIG-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWZ6_CLOSA
putative domain HDIG-containing protein
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGX44156.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_398_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3972..5306)
DNA (1335bp) protein (445aa)
NADH oxidase {ECO:0000313|EMBL:EES48903.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EES48903.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
NADH oxidase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URX4_CLOBO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L1_007_061G1_scaffold_398_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5786..6841)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QT61_CLOBU
Cell division protein FtsZ {ECO:0000313|EMBL:KHD16074.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Tubulin/FtsZ GTPase
L1_007_061G1_scaffold_398_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7021..7776
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97018.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L1_007_061G1_scaffold_398_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7836..8639)
DNA (804bp) protein (268aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9E4_9CLOT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EKQ53414.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Cof-like hydrolase
L1_007_061G1_scaffold_398_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8829..9452
DNA (624bp) protein (208aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTN5_CLOSA
ytaF; putative sporulation protein YtaF
Putative sporulation protein YtaF {ECO:0000313|EMBL:AGX44159.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_398_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9639..10688
DNA (1050bp) protein (350aa)
rpfG3; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Response regulator (CheY-like receiver and HD-GYP domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U0P5_9CLOT
Response regulator (CheY-like receiver and HD-GYP domain containing protein) {ECO:0000313|EMBL:EKQ53412.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_061G1_scaffold_398_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10702..11745
DNA (1044bp) protein (348aa)
Response regulator (CheY-like, AAA-type ATPase, and DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZN1_9CLOT
Response regulator (CheY-like, AAA-type ATPase, and DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ53411.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
response regulator
L1_007_061G1_scaffold_398_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11815..12327)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUQ5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55242.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_398_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12341..13843)
DNA (1503bp) protein (501aa)
cobyric acid synthase n=1 Tax=Clostridium beijerinckii RepID=UPI0002EDF657
cobQ; cobyric acid synthase CobQ
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_061G1_scaffold_398_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13892..14542)
DNA (651bp) protein (217aa)
PP-loop superfamily ATP-utilizing enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T2D8_9CLOT
PP-loop superfamily ATP-utilizing enzyme {ECO:0000313|EMBL:EKQ53408.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
PP-loop superfamily ATP-utilizing enzyme
L1_007_061G1_scaffold_398_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14610..15677)
DNA (1068bp) protein (356aa)
cobD2; threonine-phosphate decarboxylase CobD (EC:4.1.1.81)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZM8_9CLOT
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:EKQ53406.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_061G1_scaffold_398_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15697..16647)
DNA (951bp) protein (317aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MU96_CLOSA
cobD2; cobalamin biosynthesis protein CobD
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_398_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16670..17272)
DNA (603bp) protein (201aa)
fructose-2,6-bisphosphatase (EC:3.1.3.73)
Phosphoglycerate mutase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M250_9CLOT
Phosphoglycerate mutase {ECO:0000313|EMBL:EHI98832.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L1_007_061G1_scaffold_398_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17391..17774)
DNA (384bp) protein (128aa)
Cobalamin biosynthesis protein CobU n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MKB1_9CLOT
cobU2; cobalamin biosynthesis protein CobU
Cobalamin biosynthesis protein CobU {ECO:0000313|EMBL:AGF55236.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_398_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17787..18593)
DNA (807bp) protein (269aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cobS; cobalamin synthase CobS (EC:2.-.-.-)
Cobalamin synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M248_9CLOT
L1_007_061G1_scaffold_398_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18658..19185)
DNA (528bp) protein (176aa)
cobU1; adenosylcobinamide-phosphate guanylyltransferase CobU (EC:2.7.1.156 2.7.7.62)
Cobalbumin biosynthesis protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M247_9CLOT
Cobalbumin biosynthesis protein {ECO:0000313|EMBL:EHI98829.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L1_007_061G1_scaffold_398_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19255..19785)
DNA (531bp) protein (177aa)
btuR; Cob(I)yrinic acid a,c-diamide adenosyltransferase BtuR (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase BtuR {ECO:0000313|EMBL:AGF55233.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AGF55233.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase BtuR n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFU6_9CLOT
L1_007_061G1_scaffold_398_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19957..21045)
DNA (1089bp) protein (363aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUA4_CLOSA
L1_007_061G1_scaffold_398_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21164..21940)
DNA (777bp) protein (259aa)
cbiJ; cobalt-precorrin-6A reductase CbiJ (EC:1.3.1.-)
Cobalt-precorrin-6A reductase CbiJ {ECO:0000313|EMBL:AGX44180.1}; EC=1.3.1.- {ECO:0000313|EMBL:AGX44180.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cobalt-precorrin-6A reductase CbiJ n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUA9_CLOSA
L1_007_061G1_scaffold_398_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21969..22703)
DNA (735bp) protein (245aa)
cbiH; cobalt-precorrin-3B C(17)-methyltransferase CbiH (EC:2.1.1.-)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCK7_CLOBU
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:ETI88652.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L1_007_061G1_scaffold_398_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22767..23111)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FTN7_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD67654.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L1_007_061G1_scaffold_398_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23111..24181)
DNA (1071bp) protein (357aa)
Cobalamin (Vitamin B12) biosynthesis CbiG protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTT7_CLOSA
cobalamin (vitamin B12) biosynthesis CbiG protein
Cobalamin (Vitamin B12) biosynthesis CbiG protein {ECO:0000313|EMBL:AGX44209.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_398_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24265..25032)
DNA (768bp) protein (256aa)
cbiF; putative cobalt-precorrin-4 C(11)-methyltransferase CbiF (EC:2.1.1.-)
Putative cobalt-precorrin-4 C(11)-methyltransferase CbiF {ECO:0000313|EMBL:AGF57381.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGF57381.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Putative cobalt-precorrin-4 C(11)-methyltransferase CbiF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRK3_9CLOT
L1_007_061G1_scaffold_398_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25249..25914)
DNA (666bp) protein (222aa)
UPI0003D6709C related cluster n=1 Tax=unknown RepID=UPI0003D6709C
Cobalt-precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:KHD16062.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cobalt-precorrin-2 C(20)-methyltransferase
L1_007_061G1_scaffold_398_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26055..26636)
DNA (582bp) protein (194aa)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M094_9CLOT
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:EHI98799.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit
L1_007_061G1_scaffold_398_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26659..27285)
DNA (627bp) protein (209aa)
cbiE; cobalt-precorrin-6Y C(5,15)-methyltransferase (EC:2.1.1.-)
UPI0003D678DF related cluster n=1 Tax=unknown RepID=UPI0003D678DF
Uncharacterized protein {ECO:0000313|EMBL:KJZ95889.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L1_007_061G1_scaffold_398_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27343..28476)
DNA (1134bp) protein (378aa)
cbiD; putative cobalt-precorrin-6A synthase (EC:2.1.1.-)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative cobalt-precorrin-6A synthase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTU1_CLOSA
Displaying 30 items

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