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L1_007_061G1_scaffold_433

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_433_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(136..1851)
DNA (1716bp) protein (572aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium botulinum B RepID=B2TPM5_CLOBB
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:AIY79638.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
methyl-accepting chemotaxis sensory transducer
L1_007_061G1_scaffold_433_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1973..2815)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=Clostridium butyricum RepID=M8K838_CLOBU
Lactose ABC transporter permease {ECO:0000313|EMBL:KHD16510.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
binding-protein-dependent transport system inner membrane protein
L1_007_061G1_scaffold_433_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2808..3692)
DNA (885bp) protein (295aa)
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEP53858.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
lacF; lactose transport system permease protein LacF
L1_007_061G1_scaffold_433_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3956..5269)
DNA (1314bp) protein (438aa)
UPI0003D5ACD8 related cluster n=1 Tax=unknown RepID=UPI0003D5ACD8
ABC transporter sugar binding protein {ECO:0000313|EMBL:KJZ83759.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
extracellular solute-binding protein
L1_007_061G1_scaffold_433_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5572..6582)
DNA (1011bp) protein (337aa)
LacI family transcriptional regulator n=1 Tax=Clostridium beijerinckii RepID=UPI00035DB0B6
LacI family transcriptional regulator {ECO:0000313|EMBL:ETD71383.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
LacI family transcriptional regulator
L1_007_061G1_scaffold_433_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6836..7786)
DNA (951bp) protein (317aa)
UPI0003D62CFA related cluster n=1 Tax=unknown RepID=UPI0003D62CFA
ABC transporter {ECO:0000313|EMBL:KHD16177.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L1_007_061G1_scaffold_433_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7920..8675)
DNA (756bp) protein (252aa)
Ferrichrome transport ATP-binding protein FhuC n=4 Tax=Clostridium butyricum RepID=B1R1G8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36391.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
iron chelate uptake ABC transporter ATP-binding protein
L1_007_061G1_scaffold_433_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8677..9678)
DNA (1002bp) protein (334aa)
UPI0003D68B0A related cluster n=1 Tax=unknown RepID=UPI0003D68B0A
Iron ABC transporter permease {ECO:0000313|EMBL:KHD16179.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fecCD transport family protein
L1_007_061G1_scaffold_433_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9668..10621)
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium butyricum RepID=C4IIB1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36389.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
iron compound ABC uptake transporter, permease protein
L1_007_061G1_scaffold_433_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10887..12875)
DNA (1989bp) protein (663aa)
Serine phosphatase n=3 Tax=Clostridium butyricum RepID=B1R1F8_CLOBU
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KHD16169.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L1_007_061G1_scaffold_433_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12933..13370)
DNA (438bp) protein (146aa)
Serine-protein kinase RsbW {ECO:0000313|EMBL:KJZ83910.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJZ83910.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Anti-sigma regulatory factor n=4 Tax=Clostridium butyricum RepID=B1R1F9_CLOBU
anti-sigma regulatory factor, serine/threonine protein kinase
L1_007_061G1_scaffold_433_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13427..15535)
DNA (2109bp) protein (703aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glycogen debranching protein GlgX (EC:3.2.1.68)
Putative glycogen debranching enzyme GlgX n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K654_CLOBU
L1_007_061G1_scaffold_433_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15589..15894)
DNA (306bp) protein (102aa)
UPI0003D634DD related cluster n=1 Tax=unknown RepID=UPI0003D634DD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
anti-sigma-factor antagonist
L1_007_061G1_scaffold_433_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16353..17570)
DNA (1218bp) protein (406aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Tryptophan synthase beta chain n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTR5_CLOBO
L1_007_061G1_scaffold_433_15
unknown

Not on your lists

comp(17600..18115)
DNA (516bp) protein (172aa)

This feature has no annotations

L1_007_061G1_scaffold_433_16
unknown

Not on your lists

comp(18129..18380)
DNA (252bp) protein (84aa)

This feature has no annotations

L1_007_061G1_scaffold_433_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18565..21102)
DNA (2538bp) protein (846aa)
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHR3_9FIRM
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein {ECO:0000313|EMBL:EET59803.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
phosphoenolpyruvate synthase/pyruvate phosphate dikinase
L1_007_061G1_scaffold_433_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21346..22284)
DNA (939bp) protein (313aa)
Nucleotide-binding domain-containing protein CobW/HypB/UreG family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MN87_9CLOT
nucleotide-binding domain-containing protein CobW/HypB/UreG family
Nucleotide-binding domain-containing protein CobW/HypB/UreG family {ECO:0000313|EMBL:AGF56186.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_433_19
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22309..23520)
DNA (1212bp) protein (404aa)
Cobalamin synthesis protein, P47K n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQI1_CLOSA
cobW; cobalamin synthesis protein CobW
Cobalamin synthesis protein CobW {ECO:0000313|EMBL:AGF56185.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_061G1_scaffold_433_20
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23843..24043)
DNA (201bp) protein (67aa)
Putative stress-responsive transcriptional regulator PspC n=3 Tax=Clostridium acetobutylicum RepID=F0KE55_CLOAE
Putative stress-responsive transcriptional regulator PspC
Putative stress-responsive transcriptional regulator PspC {ECO:0000313|EMBL:AAK80606.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L1_007_061G1_scaffold_433_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24202..25131)
DNA (930bp) protein (310aa)
Transporter n=2 Tax=Clostridium butyricum RepID=B1QUX1_CLOBU
Transporter {ECO:0000313|EMBL:EEP54503.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative membrane protein
L1_007_061G1_scaffold_433_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25419..26078)
DNA (660bp) protein (220aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
queC; 7-cyano-7-deazaguanine synthase (EC:6.3.4.20)
7-cyano-7-deazaguanine synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9Z8_9CLOT
L1_007_061G1_scaffold_433_23
Gemella morbillorum, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26621..26935
DNA (315bp) protein (105aa)
Uncharacterized protein n=448 Tax=Firmicutes RepID=L7VNT4_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV35983.1}; TaxID=562982 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella morbillorum M424.;"
L1_007_061G1_scaffold_433_24
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26954..27337
DNA (384bp) protein (128aa)
Uncharacterized protein n=474 Tax=Firmicutes RepID=L7VU39_LISMN
hypothetical protein
Conjugative transposon protein {ECO:0000313|EMBL:EOL09283.1}; TaxID=1157453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0158.;"
L1_007_061G1_scaffold_433_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27366..28751
DNA (1386bp) protein (462aa)
Uncharacterized protein n=384 Tax=Bacteria RepID=L7VSY4_LISMN
FtsK/SpoIIIE family protein
FtsK/SpoIIIE family cell division protein {ECO:0000313|EMBL:EOH38973.1}; TaxID=1157480 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0185.;"
L1_007_061G1_scaffold_433_26
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28929..30134
DNA (1206bp) protein (402aa)
Tn5251 transcriptional regulator Cro/CI family n=377 Tax=Bacteria RepID=B5E598_STRP4
Tn916 ORF20 phage replication initiation factor PEP
Phage replication initiation {ECO:0000313|EMBL:ELA76148.1}; TaxID=1138891 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0011.;"
L1_007_061G1_scaffold_433_27
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30177..30398
DNA (222bp) protein (74aa)
Uncharacterized protein n=449 Tax=Bacteria RepID=L7VTG0_LISMN
Tn916 ORF19 protein
Uncharacterized protein {ECO:0000313|EMBL:EOE09588.1}; TaxID=1151200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0079.;"
L1_007_061G1_scaffold_433_28
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30515..31012
DNA (498bp) protein (166aa)
Uncharacterized protein n=453 Tax=Bacteria RepID=L7VNU0_LISMN
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:EGF19524.1}; TaxID=888818 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis SK408.;"
L1_007_061G1_scaffold_433_29
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30987..31493
DNA (507bp) protein (169aa)
Uncharacterized protein n=366 Tax=Bacteria RepID=L7VU42_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM82544.1}; TaxID=749495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX4248.;"
L1_007_061G1_scaffold_433_30
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31477..33924
DNA (2448bp) protein (816aa)
Uncharacterized protein n=412 Tax=Bacteria RepID=L7VSY8_LISMN
Tn916 ORF16 ATP/GTP-binding protein
ATP/GTP-binding protein {ECO:0000313|EMBL:ELA76152.1}; TaxID=1138891 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0011.;"
Displaying items 1-30 of 33 in total

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