ggKbase home page

L1_007_061G1_scaffold_438

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_438_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

154..612
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RI79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93416.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(679..4362)
DNA (3684bp) protein (1228aa)
PAS domain S-box protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RI80_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EHQ46548.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L1_007_061G1_scaffold_438_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4533..5423
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RI81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93418.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SIS (Sugar ISomerase) domain containing transcriptional regulator
L1_007_061G1_scaffold_438_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5546..6979
DNA (1434bp) protein (478aa)
bglA6; 6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QY14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93419.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6966..7493
DNA (528bp) protein (176aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RI83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93420.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7503..8798
DNA (1296bp) protein (432aa)
celB; PTS system, cellobiose-specific IIC component (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. D7 RepID=C3RI84_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8813..9727
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QY17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93422.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
putative auxin efflux carrier
L1_007_061G1_scaffold_438_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9732..10718)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QY18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93423.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_061G1_scaffold_438_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10870..12189
DNA (1320bp) protein (440aa)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Coprobacillus RepID=C3RI87_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
celB6; PTS system lactose/cellobiose-specific iic component
L1_007_061G1_scaffold_438_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12215..14482
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QY21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93426.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_061G1_scaffold_438_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14592..15572)
DNA (981bp) protein (327aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RI89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93427.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_061G1_scaffold_438_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15687..16685
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RI90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34893.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator with cupin sensor, AraC family
L1_007_061G1_scaffold_438_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16802..18172
DNA (1371bp) protein (457aa)
bglP6; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
PTS system, glucose-like IIB component n=3 Tax=Coprobacillus RepID=G9QY24_9FIRM
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EHM93429.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18221..18703
DNA (483bp) protein (161aa)
PTS system, glucose subfamily, IIA component n=3 Tax=Coprobacillus RepID=G9QY25_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHM93430.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system transporter subunit IIA
L1_007_061G1_scaffold_438_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18714..21287
DNA (2574bp) protein (858aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RI92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46535.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glycoside hydrolase
L1_007_061G1_scaffold_438_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21455..22861
DNA (1407bp) protein (469aa)
rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=3 Tax=Coprobacillus RepID=G9QY27_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:EHM93432.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_438_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22864..24117
DNA (1254bp) protein (418aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=3 Tax=Coprobacillus RepID=G9QY28_9FIRM
L1_007_061G1_scaffold_438_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24128..24952
DNA (825bp) protein (275aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Rhamnulose-1-phosphate aldolase n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QY29_9FIRM
Rhamnulose-1-phosphate aldolase
L1_007_061G1_scaffold_438_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25055..26134
DNA (1080bp) protein (360aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9QY30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93435.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
AraC-type DNA-binding domain-containing proteins
Displaying 19 items

View Taxonomy