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L1_007_061G1_scaffold_441

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_441_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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484..630
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R2P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91197.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_441_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

617..898
DNA (282bp) protein (94aa)
GBSi1, group II intron, maturase family protein n=4 Tax=Erysipelotrichaceae RepID=B0N960_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45593.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Retron-type reverse transcriptase
L1_007_061G1_scaffold_441_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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977..1414
DNA (438bp) protein (146aa)
Recombinase n=3 Tax=Erysipelotrichaceae RepID=R5RV11_9FIRM
Recombinase {ECO:0000313|EMBL:CCZ36687.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Retron-type reverse transcriptase
L1_007_061G1_scaffold_441_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1852..3414)
DNA (1563bp) protein (521aa)
ABC transporter, substrate-binding protein, QAT family n=3 Tax=Erysipelotrichaceae RepID=B0N963_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91194.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
opuAB; glycine betaine ABC transporter permease protein OpuAB
L1_007_061G1_scaffold_441_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3416..4540)
DNA (1125bp) protein (375aa)
Glycine betaine/L-proline transport ATP binding subunit n=4 Tax=Erysipelotrichaceae RepID=B0N964_9FIRM
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:EHM91193.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycine betaine/L-proline ABC transporter ATP-binding protein
L1_007_061G1_scaffold_441_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4647..4958)
DNA (312bp) protein (104aa)
cdr; coenzyme A disulfide reductase (EC:1.8.1.14)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N965_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36690.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_061G1_scaffold_441_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5043..6227
DNA (1185bp) protein (395aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=4 Tax=Erysipelotrichaceae RepID=B0N966_9FIRM
L1_007_061G1_scaffold_441_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6243..6986
DNA (744bp) protein (248aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RV18_9FIRM
L1_007_061G1_scaffold_441_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7163..7546
DNA (384bp) protein (128aa)
Desulfoferrodoxin (EC:1.15.1.2)
Desulfoferrodoxin n=5 Tax=Erysipelotrichaceae RepID=C3RJU6_9FIRM
Desulfoferrodoxin {ECO:0000313|EMBL:EHQ45600.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_061G1_scaffold_441_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7692..8654)
DNA (963bp) protein (321aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=4 Tax=Erysipelotrichaceae RepID=B0N969_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDS17226.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
short chain dehydrogenase/reductase
L1_007_061G1_scaffold_441_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


8810..9223
DNA (414bp) protein (138aa)
50S ribosomal protein L11 n=5 Tax=Erysipelotrichaceae RepID=B0N970_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
rplK; 50S ribosomal protein L11
L1_007_061G1_scaffold_441_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9291..9977
DNA (687bp) protein (229aa)
50S ribosomal protein L1 n=4 Tax=Erysipelotrichaceae RepID=B0N971_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
LSU ribosomal protein L1P
L1_007_061G1_scaffold_441_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10151..10750
DNA (600bp) protein (200aa)
50S ribosomal protein L10 n=2 Tax=Erysipelotrichaceae RepID=B0N972_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
rplJ; 50S ribosomal protein L10
L1_007_061G1_scaffold_441_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10780..11151
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=5 Tax=Erysipelotrichaceae RepID=B0N973_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
LSU ribosomal protein L12P
L1_007_061G1_scaffold_441_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11206..11799
DNA (594bp) protein (198aa)
Methyltransferase small domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N974_9FIRM
Methyltransferase small domain protein {ECO:0000313|EMBL:EDS17231.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_061G1_scaffold_441_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11961..15632
DNA (3672bp) protein (1224aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DNA-directed RNA polymerase subunit beta n=3 Tax=Coprobacillus RepID=C3RJV3_9FIRM
rpoB; DNA-directed RNA polymerase subunit beta
L1_007_061G1_scaffold_441_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15644..19312
DNA (3669bp) protein (1223aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DNA-directed RNA polymerase subunit beta' n=3 Tax=Coprobacillus RepID=C3RJV4_9FIRM
DNA-directed RNA polymerase subunit beta'
L1_007_061G1_scaffold_441_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19843..20247
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RJV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91180.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_441_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20241..20612
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N979_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36703.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_061G1_scaffold_441_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20669..21121
DNA (453bp) protein (151aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N980_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36704.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_061G1_scaffold_441_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


21335..21748
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=5 Tax=Erysipelotrichaceae RepID=B0N981_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
SSU ribosomal protein S12P
L1_007_061G1_scaffold_441_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


21777..22247
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=5 Tax=Erysipelotrichaceae RepID=B0N982_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SSU ribosomal protein S7P
L1_007_061G1_scaffold_441_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22281..24356
DNA (2076bp) protein (692aa)
Elongation factor G n=5 Tax=Erysipelotrichaceae RepID=B0N983_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
translation elongation factor G
L1_007_061G1_scaffold_441_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24441..25625
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=5 Tax=Erysipelotrichaceae RepID=B0N984_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_061G1_scaffold_441_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25775..26083
DNA (309bp) protein (103aa)
Lichenan-specific phosphotransferase enzyme IIA component n=5 Tax=Erysipelotrichaceae RepID=B0N985_9FIRM
PTS system, lactose-specific IIa component {ECO:0000313|EMBL:EHM91173.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
Displaying 25 items

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