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L1_007_061G1_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_443_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67..498)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=18 Tax=Bifidobacterium RepID=RL11_BIFLD
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_443_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(761..1654)
DNA (894bp) protein (298aa)
Transcription termination/antitermination protein NusG n=11 Tax=Bifidobacterium RepID=D6DCC9_BIFLN
transcription termination/antitermination factor NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_061G1_scaffold_443_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1684..1911)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=12 Tax=Bifidobacterium RepID=D6DCD0_BIFLN
preprotein translocase, SecE subunit, bacterial
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_443_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2155..3360)
DNA (1206bp) protein (402aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5ND70_9BIFI
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:BAP84345.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
aspartate aminotransferase
L1_007_061G1_scaffold_443_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3451..4584)
DNA (1134bp) protein (378aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Glutamate 5-kinase n=15 Tax=Bifidobacterium RepID=PROB_BIFLD
gamma-glutamyl kinase
L1_007_061G1_scaffold_443_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4585..6276)
DNA (1692bp) protein (564aa)
GTPase Obg n=16 Tax=Bifidobacterium RepID=OBG_BIFLO
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
GTPase
L1_007_061G1_scaffold_443_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6345..6593)
DNA (249bp) protein (83aa)
50S ribosomal protein L27 n=20 Tax=Bifidobacterium RepID=RL27_BIFLD
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_061G1_scaffold_443_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6616..6924)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=18 Tax=Bifidobacterium RepID=RL21_BIFLD
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_061G1_scaffold_443_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7076..10111)
DNA (3036bp) protein (1012aa)
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:CBK70157.1}; EC=3.1.26.12 {ECO:0000313|EMBL:CBK70157.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
ribonuclease, Rne/Rng family (EC:3.1.26.12)
Ribonuclease, Rne/Rng family n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCD6_BIFLN
L1_007_061G1_scaffold_443_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10424..11698)
DNA (1275bp) protein (425aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4U4_BIFLO
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CCY95413.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
dapE; succinyl-diaminopimelate desuccinylase
L1_007_061G1_scaffold_443_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11757..12680
DNA (924bp) protein (308aa)
Transport protein n=17 Tax=Bifidobacterium RepID=F8ARQ3_BIFLN
Transporter, auxin efflux carrier domain protein {ECO:0000313|EMBL:KFI69452.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transporter
L1_007_061G1_scaffold_443_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12856..12990)
DNA (135bp) protein (45aa)
Permease component of hypothetical ABC-type transport system n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPJ8_BIFLD
transporter
Putative membrane protein {ECO:0000313|EMBL:EIJ25256.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_443_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12987..14129)
DNA (1143bp) protein (381aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD46_BIFLN
Putative membrane protein {ECO:0000313|EMBL:EIJ29289.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
transporter
L1_007_061G1_scaffold_443_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14305..15045)
DNA (741bp) protein (247aa)
SalX-type ABC antimicrobial peptide transport system ATPase component n=3 Tax=Bifidobacterium RepID=B3DPJ7_BIFLD
SalX-type ABC antimicrobial peptide transport system ATPase
SalX-type ABC antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:ACD99056.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_443_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15357..15473
DNA (117bp) protein (39aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=B3DPJ6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44913.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_443_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16311..16880
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI67782.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L1_007_061G1_scaffold_443_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16688..18142)
DNA (1455bp) protein (485aa)
Septum formation protein Maf n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2I3W5_BIFLN
Septum formation protein Maf {ECO:0000313|EMBL:KEY32221.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_061G1_scaffold_443_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18279..19391)
DNA (1113bp) protein (371aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Homoserine kinase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B935_BIFLN
thrB; homoserine kinase
L1_007_061G1_scaffold_443_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19498..20814)
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWK9_BIFLJ
homoserine dehydrogenase
L1_007_061G1_scaffold_443_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20974..22566)
DNA (1593bp) protein (531aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Diaminopimelate decarboxylase n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GWM6_BIFLN
lysA; diaminopimelate decarboxylase
L1_007_061G1_scaffold_443_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(22569..24431)
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZG2_9BIFI
arginyl-tRNA synthase
L1_007_061G1_scaffold_443_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24645..25310
DNA (666bp) protein (222aa)
AcrR-type transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2J6_BIFLM
Putative transcriptional regulator {ECO:0000313|EMBL:BAP84364.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
acrr-type transcriptional regulator
L1_007_061G1_scaffold_443_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25307..26584
DNA (1278bp) protein (426aa)
Major Facilitator Superfamily n=3 Tax=Bifidobacterium RepID=D6DCE5_BIFLN
Putative macrolide efflux protein {ECO:0000313|EMBL:BAP84365.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Major Facilitator Superfamily.
L1_007_061G1_scaffold_443_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26671..27603
DNA (933bp) protein (311aa)
FhuR3 n=3 Tax=Bifidobacterium longum subsp. longum RepID=E4R2J4_BIFLM
fhuR3; fhur3
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ23432.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_443_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27703..28950
DNA (1248bp) protein (416aa)
Bifunctional PLP-dependent enzyme n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPI7_BIFLD
malY1; PLP-dependent protein
Bifunctional PLP-dependent enzyme {ECO:0000313|EMBL:ACD99046.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_443_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28999..30324)
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
UDP-N-acetylglucosamine enolpyruvyl transferase n=14 Tax=Bifidobacterium RepID=B3DPI6_BIFLD
murA; mura
L1_007_061G1_scaffold_443_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30574..31920
DNA (1347bp) protein (449aa)
NADH oxidase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4V8_BIFLO
nox; NADH oxidase
NADH oxidase {ECO:0000313|EMBL:AAN25067.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_443_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32126..33253)
DNA (1128bp) protein (376aa)
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWL6_BIFLJ
diguanylate cyclase
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:ADH01272.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_061G1_scaffold_443_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33293..34225)
DNA (933bp) protein (311aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4W0_BIFLO
CAAX amino terminal protease family.
Uncharacterized protein {ECO:0000313|EMBL:AAN25065.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_443_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34225..34740)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI67765.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying items 1-30 of 65 in total

View Taxonomy