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L1_007_061G1_scaffold_459

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_459_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..306
DNA (306bp) protein (102aa)
Beta-fructofuranosidase (Sucrase/invertase) possible inulinase n=2 Tax=Bifidobacterium RepID=Q8CY57_BIFLO
beta-fructofuranosidase
Beta-fructofuranosidase (Sucrase/invertase) possible inulinase {ECO:0000313|EMBL:AAN23970.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_459_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

501..1283
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=10 Tax=Bifidobacterium RepID=D6DB86_BIFLN
ABC transporter permease
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ67009.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_459_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1543..2613
DNA (1071bp) protein (357aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=11 Tax=Bacteria RepID=D6DB87_BIFLN
ABC transporter substrate-binding protein
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components {ECO:0000313|EMBL:CBK69758.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_061G1_scaffold_459_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2737..3924
DNA (1188bp) protein (396aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EE14_BIFLI
nucleoside hydrolase
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EEQ56258.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_061G1_scaffold_459_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4193..4987)
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
L1_007_061G1_scaffold_459_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4984..5703)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=11 Tax=Bacteria RepID=RECO_BIFLD
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_061G1_scaffold_459_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5752..7464)
DNA (1713bp) protein (571aa)
Esterase/lipase n=4 Tax=Bacteria RepID=B3DQ64_BIFLD
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71531.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
hypothetical protein
L1_007_061G1_scaffold_459_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7585..8808)
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=12 Tax=Bifidobacterium RepID=D6DB93_BIFLN
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_007_061G1_scaffold_459_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8805..9995)
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Bacteria RepID=DXR_BIFLD
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
L1_007_061G1_scaffold_459_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9992..11695)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B3DQ61_BIFLD
DivIVA domain repeat protein {ECO:0000313|EMBL:CBK69765.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DivIVA domain repeat protein
L1_007_061G1_scaffold_459_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12164..12580)
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DQ60_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44012.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_459_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12696..13577)
DNA (882bp) protein (294aa)
Predicted secreted protein containing a PDZ domain n=4 Tax=Bifidobacterium RepID=D6DB96_BIFLN
Predicted secreted protein containing a PDZ domain
Hypothetical secreted protein {ECO:0000313|EMBL:ACD97558.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_459_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13798..15543
DNA (1746bp) protein (582aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G7Z1_BIFLO
Hydrolase domain protein {ECO:0000313|EMBL:EIJ29853.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hydrolase
L1_007_061G1_scaffold_459_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15616..17190)
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
UvrD/REP helicase n=4 Tax=Bifidobacterium longum subsp. longum RepID=C2GW65_BIFLN
DNA helicase II
L1_007_061G1_scaffold_459_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17336..18991
DNA (1656bp) protein (552aa)
Predicted aminoglycoside phosphotransferase n=5 Tax=Bifidobacterium RepID=D6DB98_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80669.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Predicted aminoglycoside phosphotransferase
L1_007_061G1_scaffold_459_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19140..19364
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_061G1_scaffold_459_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19425..20318)
DNA (894bp) protein (298aa)
Predicted metal-dependent phosphoesterases (PHP family) n=8 Tax=Bifidobacterium RepID=D6DBA0_BIFLN
hypothetical protein
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBK69771.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_061G1_scaffold_459_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20326..20574)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_459_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20576..21193
DNA (618bp) protein (206aa)
Vitamin K epoxide reductase family n=5 Tax=Bifidobacterium longum RepID=C2GW61_BIFLN
hypothetical protein
Vitamin K epoxide reductase family {ECO:0000313|EMBL:EEI80666.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_061G1_scaffold_459_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21199..22092)
DNA (894bp) protein (298aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B3DQ52_BIFLD
L1_007_061G1_scaffold_459_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22200..22994
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L1_007_061G1_scaffold_459_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23123..23968
DNA (846bp) protein (282aa)
Phospholipase n=4 Tax=Bifidobacterium RepID=V6XZH0_BIFLN
esterase-like protein
Phospholipase {ECO:0000313|EMBL:ESV33911.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_061G1_scaffold_459_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24035..24934)
DNA (900bp) protein (300aa)
Membrane protease-like protein n=15 Tax=Bifidobacterium RepID=B3DQ49_BIFLD
hypothetical protein
Membrane protease-like protein {ECO:0000313|EMBL:ACD97548.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying 23 items

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