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L1_007_061G1_scaffold_462

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_462_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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255..1118
DNA (864bp) protein (288aa)
Putative membrane protein n=2 Tax=Clostridium difficile RepID=T4TSB0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ENY91536.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_061G1_scaffold_462_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1131..1523
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 PF9_9FIRM">RepID=U2PPF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK45996.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_061G1_scaffold_462_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1483..3879
DNA (2397bp) protein (799aa)
AAA-like domain protein n=2 Tax=Clostridiales RepID=T4TQX3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ERK45997.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_061G1_scaffold_462_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3876..4832
DNA (957bp) protein (319aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA modification methylase (EC:2.1.1.72)
DNA methylase family protein n=2 Tax=Clostridium difficile RepID=T3KRR9_CLODI
L1_007_061G1_scaffold_462_5
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4829..6799
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE45350.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
DNA-repair protein
L1_007_061G1_scaffold_462_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6820..7086
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QGZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40583.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_061G1_scaffold_462_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7076..7825
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PA70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40584.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_061G1_scaffold_462_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7822..9897
DNA (2076bp) protein (692aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=11 Tax=root RepID=D4L4L1_9FIRM
L1_007_061G1_scaffold_462_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9894..10262
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2B1N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99933.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_462_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10389..13736
DNA (3348bp) protein (1116aa)
Antirestriction protein n=9 Tax=root RepID=E7GQ73_CLOSY
Antirestriction protein {ECO:0000313|EMBL:EGA92920.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L1_007_061G1_scaffold_462_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13741..13950
DNA (210bp) protein (70aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=D5Q4B8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGA92921.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_007_061G1_scaffold_462_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14141..15016)
DNA (876bp) protein (292aa)
BRO family, N-terminal domain protein n=2 Tax=Clostridium difficile RepID=T3KTV3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHL69122.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_061G1_scaffold_462_13
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15083..16417)
DNA (1335bp) protein (445aa)
Relaxase/mobilization nuclease domain protein n=2 Tax=Clostridium difficile RepID=T3KXA2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFE45356.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Relaxase/Mobilisation nuclease domain.
L1_007_061G1_scaffold_462_14
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16378..16707)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE45357.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Bacterial mobilisation protein (MobC).
L1_007_061G1_scaffold_462_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16909..17265)
DNA (357bp) protein (119aa)
Helix-turn-helix n=20 Tax=root RepID=D4ML35_9FIRM
Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG55953.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_007_061G1_scaffold_462_16

Not on your lists

17866..18849
DNA (984bp) protein (328aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=28 Tax=Bacteria RepID=C9YMG8_CLODR
Putative Fe-S-cluster redox enzyme {ECO:0000313|EMBL:AGW28745.1}; TaxID=1348855 species="Bacteria; environmental samples.;" source="uncultured bacterium EB2.;"
L1_007_061G1_scaffold_462_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19323..19760
DNA (438bp) protein (146aa)
Uncharacterized protein n=25 Tax=root RepID=C9YMG7_CLODR
DNA-directed RNA polymerase specialized sigma subunit
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CBL14566.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_061G1_scaffold_462_18
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19744..19986
DNA (243bp) protein (81aa)
Uncharacterized protein n=20 Tax=root RepID=C0CY92_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGX69114.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L1_007_061G1_scaffold_462_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19998..20720
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99923.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_462_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20816..22498
DNA (1683bp) protein (561aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNP1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHE99922.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
recombinase
L1_007_061G1_scaffold_462_21
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22531..23226
DNA (696bp) protein (232aa)
Collagen triple helix repeat family protein n=1 Tax=Clostridium difficile DA00216 RepID=T3VFX9_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF09050.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L1_007_061G1_scaffold_462_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23343..24773
DNA (1431bp) protein (477aa)
Collagen triple helix repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFB9_9CLOT
Collagen triple helix repeat protein {ECO:0000313|EMBL:EFC99478.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
collagen triple helix repeat-containing protein
Displaying 22 items

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