ggKbase home page

L1_007_061G1_scaffold_522

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_522_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..263)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ16_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51896.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_061G1_scaffold_522_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(315..1133)
DNA (819bp) protein (273aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EEQ56272.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EEQ56272.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Phosphomethylpyrimidine kinase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EE28_BIFLI
thiD; phosphomethylpyrimidine kinase
L1_007_061G1_scaffold_522_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1253..1399
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MTH9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95045.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_522_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1436..2155)
DNA (720bp) protein (240aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Thiamine biosynthesis protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUS2_BIFL1
thiE; thie
L1_007_061G1_scaffold_522_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2155..4101)
DNA (1947bp) protein (649aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Thiamine biosynthesis bifunctional protein ThiEC n=7 Tax=Bacteria RepID=THIEC_BIFLO
hydroxymethylpyrimidine synthase
L1_007_061G1_scaffold_522_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4184..5128)
DNA (945bp) protein (315aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Hydroxyethylthiazole kinase n=7 Tax=Bacteria RepID=E4R1J8_BIFLM
hydroxyethylthiazole kinase
L1_007_061G1_scaffold_522_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5564..7036
DNA (1473bp) protein (491aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glycine--tRNA ligase n=15 Tax=Bifidobacterium RepID=E4R1J9_BIFLM
glycyl-tRNA synthase
L1_007_061G1_scaffold_522_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7181..8425
DNA (1245bp) protein (415aa)
tRNA-dihydrouridine synthase n=10 Tax=Bacteria RepID=B3DQ82_BIFLD
putative dihydrouridine synthase
Possible NifR3-like protein {ECO:0000313|EMBL:AAN23982.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_522_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8537..9748
DNA (1212bp) protein (404aa)
Cell division protein FtsZ n=9 Tax=Bifidobacterium RepID=B3DQ83_BIFLD
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_522_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9761..10240
DNA (480bp) protein (160aa)
Cell division protein SepF n=21 Tax=Bacteria RepID=SEPF_BIFLD
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_522_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10362..10664
DNA (303bp) protein (101aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=B7GQ25_BIFLS
hypothetical protein
Hemolysin {ECO:0000313|EMBL:KHD94169.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_061G1_scaffold_522_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10804..12183
DNA (1380bp) protein (460aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=V6XZD7_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66991.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_522_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12205..12753
DNA (549bp) protein (183aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Lipoprotein signal peptidase n=4 Tax=Bifidobacterium longum RepID=D6DB71_BIFLN
peptidase A8
L1_007_061G1_scaffold_522_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12753..13715
DNA (963bp) protein (321aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Uncharacterized protein n=10 Tax=Bacteria RepID=Q8G7W2_BIFLO
hypothetical protein
L1_007_061G1_scaffold_522_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14031..14504
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MZI6_9BIFI
ATPase AAA {ECO:0000313|EMBL:KHD94165.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_007_061G1_scaffold_522_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14709..15575
DNA (867bp) protein (289aa)
Ribonuclease BN-like family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XVK4_9BIFI
hypothetical protein
Narrowly conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN23990.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_522_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15656..16027)
DNA (372bp) protein (124aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=B3DQ91_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:EEQ56287.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_061G1_scaffold_522_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16084..19641
DNA (3558bp) protein (1186aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
DNA polymerase III, alpha subunit n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1W6_BIFLN
DNA polymerase III subunit alpha
L1_007_061G1_scaffold_522_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19715..20164
DNA (450bp) protein (150aa)
PF13811 domain protein n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3AVI0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP83895.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_061G1_scaffold_522_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20370..22247
DNA (1878bp) protein (626aa)
Myosin-crossreactive antigen n=13 Tax=Bifidobacterium longum RepID=D6DB56_BIFLN
hypothetical protein
Myosin-crossreactive antigen {ECO:0000313|EMBL:CBK69727.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_061G1_scaffold_522_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22344..22844
DNA (501bp) protein (167aa)
Acetyltransferase n=12 Tax=Bifidobacterium RepID=B3DQ95_BIFLD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KEY31202.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_061G1_scaffold_522_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23188..23343
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6E3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:BAP84479.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Displaying 22 items

View Taxonomy