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L1_007_061G1_scaffold_552

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_552_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(133..363)
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N561_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Helix-turn-helix.
L1_007_061G1_scaffold_552_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

509..1216
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N560_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91984.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_552_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1287..1625)
DNA (339bp) protein (113aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N559_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31643.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_061G1_scaffold_552_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1660..1905)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N558_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18226.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_061G1_scaffold_552_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2109..2516)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N557_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91981.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
YolD-like protein.
L1_007_061G1_scaffold_552_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2513..4033)
DNA (1521bp) protein (507aa)
ImpB/MucB/SamB family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N556_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EDS18224.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L1_007_061G1_scaffold_552_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4386..5729
DNA (1344bp) protein (448aa)
gdh; NAD-specific glutamate dehydrogenase Gdh (EC:1.4.1.2)
Glutamate dehydrogenase n=5 Tax=Erysipelotrichaceae RepID=B0N555_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_552_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5747..6139)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N554_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18222.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_061G1_scaffold_552_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7546..9396)
DNA (1851bp) protein (617aa)
ABC transporter, solute-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z9_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS19426.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC-type spermidine/putrescine transport system, permease component II
L1_007_061G1_scaffold_552_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9374..10231)
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48243.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ABC-type spermidine/putrescine transport system, permease component I
L1_007_061G1_scaffold_552_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10231..11274)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Polyamine ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z7_9FIRM
L1_007_061G1_scaffold_552_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11285..11818)
DNA (534bp) protein (178aa)
Cupin domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31526.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
XRE family transcriptional regulator
L1_007_061G1_scaffold_552_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11948..12778)
DNA (831bp) protein (277aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EDS19422.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDS19422.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
tyrA; prephenate dehydrogenase TyrA (EC:1.3.1.12)
Prephenate dehydrogenase n=2 Tax=Erysipelotrichaceae RepID=B0N2Z5_9FIRM
L1_007_061G1_scaffold_552_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12877..13260)
DNA (384bp) protein (128aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91972.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_061G1_scaffold_552_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13278..14738)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Nicotinate phosphoribosyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N2Z3_9FIRM
nicotinate phosphoribosyltransferase
L1_007_061G1_scaffold_552_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14804..15124)
DNA (321bp) protein (107aa)
LysM domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z2_9FIRM
LysM domain protein {ECO:0000313|EMBL:EDS19419.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_061G1_scaffold_552_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15185..15865)
DNA (681bp) protein (227aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Ribonuclease 3 n=4 Tax=Erysipelotrichaceae RepID=B0N2Z1_9FIRM
rncS; ribonuclease III
L1_007_061G1_scaffold_552_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15867..16841)
DNA (975bp) protein (325aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Phosphate acyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N2Z0_9FIRM
plsX; fatty acid/phospholipid synthesis protein PlsX
L1_007_061G1_scaffold_552_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16879..18897)
DNA (2019bp) protein (673aa)
ATP-dependent DNA helicase RecG n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGV2_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EHQ48234.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATP-dependent DNA helicase RecG
L1_007_061G1_scaffold_552_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18945..19856)
DNA (912bp) protein (304aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31519.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative permease
L1_007_061G1_scaffold_552_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19959..20291)
DNA (333bp) protein (111aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N2Y7_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS19414.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system beta-glucoside-specific, IIB component
L1_007_061G1_scaffold_552_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20415..21245)
DNA (831bp) protein (277aa)
PRD domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N2Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91964.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional antiterminator BglG
L1_007_061G1_scaffold_552_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21535..21765)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19412.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_061G1_scaffold_552_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22008..22313)
DNA (306bp) protein (102aa)
ptsG; putative PTS system glucose-specific EIICBA component (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N2Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35470.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_061G1_scaffold_552_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22558..22761)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35471.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L1_007_061G1_scaffold_552_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23093..25834)
DNA (2742bp) protein (914aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48228.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell wall surface anchor family protein, putative lipoprotein
L1_007_061G1_scaffold_552_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26061..26750)
DNA (690bp) protein (230aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32975.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_061G1_scaffold_552_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26867..27271)
DNA (405bp) protein (135aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Alanine dehydrogenase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R2N6_9FIRM
ald; alanine dehydrogenase
Displaying 28 items

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