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L1_007_061G1_scaffold_639

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_639_1
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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155..1786
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MQE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72881.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
transposase IS4 family protein
L1_007_061G1_scaffold_639_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1863..2930
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41864.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_061G1_scaffold_639_3
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3468..4079
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-1 RepID=R9INB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21258.1}; Flags: Fragment;; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
transposase IS66
L1_007_061G1_scaffold_639_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4266..4508
DNA (243bp) protein (81aa)
growth regulator n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B3C5E7
Growth regulator {ECO:0000313|EMBL:CDD73871.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_007_061G1_scaffold_639_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4510..4815
DNA (306bp) protein (102aa)
growth inhibitor PemK n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B5FCBA
Uncharacterized protein {ECO:0000313|EMBL:EEG89889.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L1_007_061G1_scaffold_639_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5144..5296
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49427.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Predicted transcriptional regulators
L1_007_061G1_scaffold_639_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6326..7093
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56864.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
TatD family hydrolase
L1_007_061G1_scaffold_639_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7168..8034
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INI9_9CLOT
dimethyladenosine transferase
L1_007_061G1_scaffold_639_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8231..9616
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57455.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
family 1 extracellular solute-binding protein
L1_007_061G1_scaffold_639_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9662..10564
DNA (903bp) protein (301aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZ62_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG55644.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter
L1_007_061G1_scaffold_639_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10557..11417
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57453.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L1_007_061G1_scaffold_639_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11414..12535
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57452.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_007_061G1_scaffold_639_13
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12556..13275
DNA (720bp) protein (240aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F744_CLOS4
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:ERJ01102.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
glycerophosphoryl diester phosphodiesterase
L1_007_061G1_scaffold_639_14
Leptotrichia sp. oral taxon 225, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13265..14017
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 225 str. F0581 RepID=U2WHU8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERL27337.1}; TaxID=1321774 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 225 str. F0581.;"
histidinol phosphate phosphatase, HisJ family protein
L1_007_061G1_scaffold_639_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14120..15094
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W346_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97244.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
LacI family transcriptional regulator
L1_007_061G1_scaffold_639_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15139..15912
DNA (774bp) protein (258aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Clostridium sp. ASF502 RepID=N2AB61_9CLOT
L1_007_061G1_scaffold_639_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15946..16428
DNA (483bp) protein (161aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Dorea RepID=A6BDK8_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CDE17484.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_007_061G1_scaffold_639_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16549..16737)
DNA (189bp) protein (63aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KLH6_9FIRM
glucosamine-6-phosphate isomerase
L1_007_061G1_scaffold_639_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17112..18203)
DNA (1092bp) protein (364aa)
Transposase n=11 Tax=Clostridium symbiosum RepID=E7GUT2_CLOSY
Transposase {ECO:0000313|EMBL:EGA91453.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transposase
Displaying 19 items

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