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L1_007_061G1_scaffold_646

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_646_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRE6_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76905.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_061G1_scaffold_646_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

319..978
DNA (660bp) protein (220aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXN6_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95287.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_646_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1062..1874)
DNA (813bp) protein (271aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=F6C5G1_BIFBA
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26327.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_646_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2001..2207)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXN4_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18853.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_061G1_scaffold_646_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2566..3198
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E664_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87931.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L1_007_061G1_scaffold_646_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3256..4308
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1G7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87932.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L1_007_061G1_scaffold_646_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4356..4616
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BN57_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20764.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_646_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4743..5357
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C5G4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20763.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_646_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5569..5661
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3V4_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89092.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_061G1_scaffold_646_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5695..5913)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C5G7_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95280.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_646_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5910..7532)
DNA (1623bp) protein (541aa)
UV-damage repair protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L095_BIFBR
ImpB/MucB/SamB family protein involved in DNA repair
ImpB/MucB/SamB family protein involved in DNA repair {ECO:0000313|EMBL:AHJ20762.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_646_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7802..9313
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Amidophosphoribosyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXM7_BIFBU
Amidophosphoribosyltransferase
L1_007_061G1_scaffold_646_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9430..10467
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Bifidobacterium breve RepID=F6C5H0_BIFBA
Phosphoribosylformylglycinamidine cyclo-ligase
L1_007_061G1_scaffold_646_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10494..11762
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BN48_BIFBR
Phosphoribosylamine--glycine ligase
L1_007_061G1_scaffold_646_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12139..13698)
DNA (1560bp) protein (520aa)
aldH; Aldehyde dehydrogenase (NAD(P)+) (EC:1.2.1.5)
Aldehyde dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXM4_BIFBU
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_646_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13817..15892)
DNA (2076bp) protein (692aa)
Phosphoglycerol transferase, contains sulfatase domain n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXM3_BIFBU
Phosphoglycerol transferase, contains sulfatase domain
Phosphoglycerol transferase, contains sulfatase domain {ECO:0000313|EMBL:ABE95274.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_646_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16187..17053)
DNA (867bp) protein (289aa)
ABC transporter, substrate-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C5H4_BIFBA
Solute binding protein of ABC transporter system
Solute binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95273.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_061G1_scaffold_646_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17393..18163)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C5H5_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26579.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_646_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18214..18450
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=3 Tax=Bifidobacterium RepID=B7GU87_BIFLS
ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L1_007_061G1_scaffold_646_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18621..18791
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=3 Tax=Bifidobacterium RepID=B7GU88_BIFLS
rpmG_1; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_646_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19010..19315
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=3 Tax=Bifidobacterium RepID=B7GU89_BIFLS
rpsN_1; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_646_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19442..19699
DNA (258bp) protein (86aa)
50S ribosomal protein L31 type B n=3 Tax=Bifidobacterium RepID=RL31B_BIFLS
rpmE_1; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L1_007_061G1_scaffold_646_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19749..19871
DNA (123bp) protein (41aa)
50S ribosomal protein L36 n=3 Tax=Bifidobacterium RepID=B7GU91_BIFLS
rpmJ_1; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L1_007_061G1_scaffold_646_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19871..20038
DNA (168bp) protein (56aa)
50S ribosomal protein L32 n=2 Tax=Bifidobacterium breve RepID=F6C5I1_BIFBA
ribosomal protein L32-like protein
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_646_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20220..20579
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E82ABD
Solute-binding protein of ABC transporter system for metals
Solute-binding protein of ABC transporter system for metals {ECO:0000313|EMBL:AHJ20752.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_061G1_scaffold_646_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20760..21887
DNA (1128bp) protein (376aa)
permease n=1 Tax=Bifidobacterium breve RepID=UPI0003022BBD
putative membrane spanning protein
Permease {ECO:0000313|EMBL:ACJ53040.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_061G1_scaffold_646_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21890..22645
DNA (756bp) protein (252aa)
TIGR03943 family protein n=3 Tax=Bifidobacterium breve RepID=D4BN39_BIFBR
putative membrane spanning protein
TIGR03943 family protein {ECO:0000313|EMBL:ERI87905.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_061G1_scaffold_646_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22904..23404
DNA (501bp) protein (167aa)
Transcriptional regulator, Fur family n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5I4_BIFBA
ferric uptake regulator family protein
Transcriptional regulator, Fur family {ECO:0000313|EMBL:AEF26577.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_061G1_scaffold_646_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23753..24100
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C5I5_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89074.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_061G1_scaffold_646_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24322..24927
DNA (606bp) protein (202aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5I7_BIFBA
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20748.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 33 in total

View Taxonomy