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L1_007_061G1_scaffold_680

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_680_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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29..3412
DNA (3384bp) protein (1128aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Bifidobacterium RepID=E8MEB8_BIFL2
carbamoyl phosphate synthase large subunit
L1_007_061G1_scaffold_680_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3412..4332
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EEQ56225.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EEQ56225.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Orotidine 5'-phosphate decarboxylase n=17 Tax=Bifidobacterium RepID=F8AUA9_BIFLN
orotidine 5'-phosphate decarboxylase
L1_007_061G1_scaffold_680_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4512..5102
DNA (591bp) protein (197aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Guanylate kinase n=17 Tax=Bifidobacterium RepID=KGUA_BIFLO
guanylate kinase
L1_007_061G1_scaffold_680_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5104..5811)
DNA (708bp) protein (236aa)
DNA polymerase III alpha subunit n=12 Tax=Bifidobacterium RepID=B3DQ35_BIFLD
polC; polc
DNA polymerase III subunit alpha {ECO:0000313|EMBL:KEY21730.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_061G1_scaffold_680_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5958..8171
DNA (2214bp) protein (738aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G811_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN23938.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L1_007_061G1_scaffold_680_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8222..8872)
DNA (651bp) protein (217aa)
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EEI80649.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEI80649.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Phospholipase/carboxylesterase n=7 Tax=Bifidobacterium longum RepID=C2GW44_BIFLN
esterase
L1_007_061G1_scaffold_680_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9100..9759
DNA (660bp) protein (220aa)
Permease protein of ABC transporter system n=16 Tax=Bifidobacterium RepID=Q8G809_BIFLO
amino acid ABC transporter permease
Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAJ67039.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_680_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9746..10420
DNA (675bp) protein (225aa)
ABC-type amino acid transport system permease component n=6 Tax=Bifidobacterium longum RepID=B3DQ39_BIFLD
amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-)
ABC-type amino acid transport system permease component {ECO:0000313|EMBL:ACD97538.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_680_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10413..11204
DNA (792bp) protein (264aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC-type amino acid transport system ATPase component n=7 Tax=Bifidobacterium longum RepID=B3DQ40_BIFLD
ABC-type amino acid transport system ATPase component {ECO:0000313|EMBL:ACD97539.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_680_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11270..12172
DNA (903bp) protein (301aa)
ABC-type amino acid transport system periplasmic component n=11 Tax=Bifidobacterium RepID=B3DQ41_BIFLD
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EIJ26298.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_680_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12408..13640
DNA (1233bp) protein (411aa)
Cystathionine beta-lyase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUV8_BIFL1
cystathionine beta-lyase
Cystathionine beta-lyase {ECO:0000313|EMBL:BAJ71552.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_061G1_scaffold_680_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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13889..14140
DNA (252bp) protein (84aa)
Glutaredoxin n=8 Tax=Bifidobacterium RepID=B3DQ43_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95105.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_680_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14251..14520)
DNA (270bp) protein (90aa)
Rrf2 family transcriptional regulator, group III n=3 Tax=Bifidobacterium longum RepID=S3DKZ1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67033.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_680_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14827..15177
DNA (351bp) protein (117aa)
NIL domain protein n=5 Tax=Bifidobacterium longum RepID=C2GW55_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71548.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_061G1_scaffold_680_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15227..15343)
DNA (117bp) protein (39aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CA90_BIFBR
transposase
Transposase {ECO:0000313|EMBL:ACA23201.1}; Flags: Fragment;; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Displaying 15 items

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