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L1_007_061G1_scaffold_732

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_732_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
tal; transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Transaldolase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DRW8_BIFLD
L1_007_061G1_scaffold_732_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(443..2551)
DNA (2109bp) protein (703aa)
Transketolase n=3 Tax=Bifidobacterium longum RepID=D6ZUG2_BIFLJ
transketolase
Transketolase {ECO:0000313|EMBL:BAJ66762.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_732_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2850..3968
DNA (1119bp) protein (373aa)
Heat-inducible transcription repressor hrcA n=7 Tax=Bifidobacterium longum RepID=D6ZUG1_BIFLJ
HrcA family transcriptional regulator
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_061G1_scaffold_732_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4024..5169
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=9 Tax=Bifidobacterium RepID=DNAJ_BIFLO
chaperone protein
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_061G1_scaffold_732_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5215..6006)
DNA (792bp) protein (264aa)
Fructosamine-3-kinase n=10 Tax=Bifidobacterium RepID=B3DRX2_BIFLD
fructosamine-3-kinase
Fructosamine kinase {ECO:0000313|EMBL:AIW43801.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_732_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6151..7035
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK70485.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK70485.1};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Undecaprenyl-diphosphatase n=13 Tax=Bifidobacterium RepID=UPPP_BIFLD
undecaprenyl-diphosphatase
L1_007_061G1_scaffold_732_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7192..8049)
DNA (858bp) protein (286aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G6C3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95624.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_732_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8845..10878
DNA (2034bp) protein (678aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Threonine--tRNA ligase n=10 Tax=Bifidobacterium RepID=SYT_BIFLO
thrS; threonyl-tRNA synthetase
L1_007_061G1_scaffold_732_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11018..11602
DNA (585bp) protein (195aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=Q8G6C1_BIFLO
HIT family hydrolase
HIT family hydrolase {ECO:0000313|EMBL:AIW43797.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_732_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11889..12464
DNA (576bp) protein (192aa)
Probable transcriptional regulatory protein BIL_09440 n=4 Tax=Bifidobacterium longum RepID=D6DDB8_BIFLN
hypothetical protein
Probable transcriptional regulatory protein BLJ_1046 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_061G1_scaffold_732_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12470..13054
DNA (585bp) protein (195aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Crossover junction endodeoxyribonuclease RuvC n=8 Tax=Bifidobacterium RepID=D6ZUF3_BIFLJ
holliday junction resolvase
L1_007_061G1_scaffold_732_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13112..13738
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Holliday junction ATP-dependent DNA helicase RuvA n=10 Tax=Bifidobacterium RepID=D6DDB9_BIFLN
Holliday junction ATP-dependent DNA helicase RuvA
L1_007_061G1_scaffold_732_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13738..14802
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Holliday junction ATP-dependent DNA helicase RuvB n=8 Tax=Bifidobacterium RepID=D6DDC0_BIFLN
ruvB; ruvb
L1_007_061G1_scaffold_732_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14867..15304
DNA (438bp) protein (146aa)
Preprotein translocase subunit n=14 Tax=Bifidobacterium RepID=B3DRY1_BIFLD
hypothetical protein
Preprotein translocase subunit {ECO:0000313|EMBL:ACD97900.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_061G1_scaffold_732_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15368..15949
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Adenine phosphoribosyltransferase n=17 Tax=Bifidobacterium RepID=APT_BIFLD
adenine phosphoribosyltransferase
L1_007_061G1_scaffold_732_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16046..17248
DNA (1203bp) protein (401aa)
Succinyl-CoA synthetase beta subunit n=18 Tax=Bifidobacterium RepID=B3DRY3_BIFLD
succinyl-CoA synthase beta subunit
Succinyl-CoA synthetase beta chain {ECO:0000313|EMBL:AAN24549.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_061G1_scaffold_732_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17248..18159
DNA (912bp) protein (304aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R357_BIFLM
sucD; sucd
L1_007_061G1_scaffold_732_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18179..19558
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G6B2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43788.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_061G1_scaffold_732_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19506..21143
DNA (1638bp) protein (546aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=3 Tax=Bifidobacterium longum RepID=PUR9_BIFLO
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_061G1_scaffold_732_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21289..21591
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MW24_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV36742.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L1_007_061G1_scaffold_732_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21490..22458)
DNA (969bp) protein (323aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=6 Tax=Bifidobacterium RepID=D6DDC6_BIFLN
Probable membrane channel protein {ECO:0000313|EMBL:BAP83591.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
major intrinsic protein
L1_007_061G1_scaffold_732_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22654..23424
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Pseudouridine synthase n=19 Tax=Bifidobacterium RepID=B3DRY9_BIFLD
pseudouridine synthase
L1_007_061G1_scaffold_732_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23421..25550
DNA (2130bp) protein (710aa)
GTP-binding protein n=5 Tax=Bifidobacterium longum RepID=E8MIY9_BIFL2
GTP-binding protein
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_732_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25842..27371
DNA (1530bp) protein (510aa)
UDP-glucose pyrophosphorylase n=6 Tax=Bifidobacterium longum RepID=B3DRZ1_BIFLD
UTP-glucose-1-phosphate uridylyltransferase
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:BAJ66741.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_061G1_scaffold_732_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27511..29424
DNA (1914bp) protein (638aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5ECS0_BIFLI
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CCY94908.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_061G1_scaffold_732_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29435..29752
DNA (318bp) protein (106aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DRZ3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70500.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_061G1_scaffold_732_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29765..32356
DNA (2592bp) protein (864aa)
DEAD/DEAH box helicase n=3 Tax=Bifidobacterium longum RepID=I3B2N4_BIFLN
helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:KEY33061.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_061G1_scaffold_732_28
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32472..32819
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=17 Tax=Bifidobacterium RepID=B3DRZ5_BIFLD
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_061G1_scaffold_732_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32951..33178
DNA (228bp) protein (76aa)
Predicted phosphatases n=14 Tax=Bifidobacterium RepID=D6DDD2_BIFLN
hydrolase
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EIJ25544.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_061G1_scaffold_732_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33132..33491
DNA (360bp) protein (120aa)
Predicted phosphatases n=14 Tax=Bifidobacterium RepID=D6DDD2_BIFLN
hydrolase
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFV36751.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying items 1-30 of 43 in total

View Taxonomy