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L1_007_061G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 685 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_0_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250..1557)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRB6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71210.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_061G1_scaffold_0_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1892..2323
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRB4_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF27968.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
araG; argininosuccinate synthase
L1_007_061G1_scaffold_0_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2487..2909)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRB3_9BIFI
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KEF27969.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L1_007_061G1_scaffold_0_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3409..4782)
DNA (1374bp) protein (458aa)
Helicase C-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PC77_9BIFI
Helicase C-terminal domain protein {ECO:0000313|EMBL:CDC16136.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
DNA/RNA helicase
L1_007_061G1_scaffold_0_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4782..6584)
DNA (1803bp) protein (601aa)
DNA/RNA helicase (EC:3.1.21.3)
Helicase C-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4Y6_9BIFI
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFM42321.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_007_061G1_scaffold_0_6
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6652..7092)
DNA (441bp) protein (147aa)
Mutator mutT protein {ECO:0000313|EMBL:EEP21358.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEP21358.1};; Uncharacterized protein {ECO:0000313|EMBL:BAQ96257.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
Mutator mutT protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEH6_9BIFI
Mutator mutT protein
L1_007_061G1_scaffold_0_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7257..9317)
DNA (2061bp) protein (687aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NY90_9BIFI
helicase IV
L1_007_061G1_scaffold_0_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9432..10436)
DNA (1005bp) protein (335aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium RepID=C0BRA4_9BIFI
Oxidoreductase {ECO:0000313|EMBL:KEF27975.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
oxidoreductase
L1_007_061G1_scaffold_0_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10711..11103
DNA (393bp) protein (131aa)
DNA mismatch endonuclease Vsr n=2 Tax=Bifidobacterium RepID=C0BRA2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16142.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
DNA mismatch repair protein Vsr
L1_007_061G1_scaffold_0_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11271..12476
DNA (1206bp) protein (402aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRA0_9BIFI
Aminotransferase {ECO:0000313|EMBL:KEF27977.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
aminotransferase
L1_007_061G1_scaffold_0_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12612..13595
DNA (984bp) protein (328aa)
Ppx/GppA phosphatase family protein n=2 Tax=Bifidobacterium RepID=C0BR99_9BIFI
Putative exopolyphosphatase {ECO:0000313|EMBL:BAR02290.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L1_007_061G1_scaffold_0_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13602..14336)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A957_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:BAR02289.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L1_007_061G1_scaffold_0_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15037..17400)
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Corynebacterium mastitidis RepID=UPI00037815A2
Uncharacterized protein {ECO:0000313|EMBL:KEF27980.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L1_007_061G1_scaffold_0_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17406..18080)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YN89_9ACTO
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIZ15013.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_061G1_scaffold_0_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18394..19491
DNA (1098bp) protein (366aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bifidobacterium RepID=C0BR96_9BIFI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEG71190.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04077.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
endonuclease
L1_007_061G1_scaffold_0_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19757..20041)
DNA (285bp) protein (95aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Exodeoxyribonuclease 7 small subunit n=2 Tax=Bifidobacterium RepID=C0BR95_9BIFI
exonuclease VII small subunit
L1_007_061G1_scaffold_0_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20044..21324)
DNA (1281bp) protein (427aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Exodeoxyribonuclease 7 large subunit n=3 Tax=Bifidobacterium RepID=B6XT26_9BIFI
exodeoxyribonuclease VII large subunit
L1_007_061G1_scaffold_0_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21649..24048
DNA (2400bp) protein (800aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT27_9BIFI
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KEF27985.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ribonucleoside-triphosphate reductase
L1_007_061G1_scaffold_0_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24183..24896
DNA (714bp) protein (238aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Bifidobacterium RepID=C0BSN6_9BIFI
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000313|EMBL:CDC16732.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
anaerobic ribonucleoside-triphosphate reductase activating protein
L1_007_061G1_scaffold_0_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25145..26002
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PDV0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16731.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_061G1_scaffold_0_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25983..29867
DNA (3885bp) protein (1295aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN4_9BIFI
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EEG71184.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
activase
L1_007_061G1_scaffold_0_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30192..31463
DNA (1272bp) protein (424aa)
Putative glutamate--cysteine ligase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN3_9BIFI
Putative glutamate--cysteine ligase {ECO:0000313|EMBL:EEG71183.1}; Putative glutamate-cysteine ligase {ECO:0000313|EMBL:BAR04070.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
gamma-glutamylcysteine synthetase
L1_007_061G1_scaffold_0_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31621..32250
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium RepID=B6XT32_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR04069.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG71182.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
AcrR family transcriptional regulator
L1_007_061G1_scaffold_0_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32713..34839
DNA (2127bp) protein (709aa)
Beta-galactosidase trimerization domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSN0_9BIFI
Beta-galactosidase {ECO:0000313|EMBL:BAR04068.1}; Beta-galactosidase trimerization domain protein {ECO:0000313|EMBL:EEG71181.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
bga; beta-galactosidase I
L1_007_061G1_scaffold_0_25
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34873..35499)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT35_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR02277.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB22198.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
TetR-type transcriptional regulator
L1_007_061G1_scaffold_0_26
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35855..37180
DNA (1326bp) protein (442aa)
Transporter, major facilitator family protein n=2 Tax=root RepID=B6XT36_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR02276.1}; Transporter, major facilitator family protein {ECO:0000313|EMBL:EEB22199.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
membrane protein with transport function
L1_007_061G1_scaffold_0_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37566..38909
DNA (1344bp) protein (448aa)
Probable glucosylceramidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2Q6_BIFAA
glucosylceramidase
Probable glucosylceramidase {ECO:0000313|EMBL:BAF39989.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_007_061G1_scaffold_0_28
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39126..39638)
DNA (513bp) protein (171aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT38_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR02274.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB22201.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
TetR-type transcriptional regulator
L1_007_061G1_scaffold_0_29
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40084..41340
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT39_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR02273.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
membrane protein with transport function
L1_007_061G1_scaffold_0_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41497..43053
DNA (1557bp) protein (519aa)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT40_9BIFI
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEB22203.1}; Putative alpha-L-arabinofuranosidase {ECO:0000313|EMBL:BAR02272.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
xsa; alpha-L-arabinofuranosidase
Displaying items 1-30 of 685 in total

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