ggKbase home page

L1_007_061G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_5_1
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13508.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L1_007_061G1_scaffold_5_2
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(215..1159)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFU76423.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
L1_007_061G1_scaffold_5_3
unknown

Not on your lists

comp(1324..1833)
DNA (510bp) protein (170aa)

This feature has no annotations

L1_007_061G1_scaffold_5_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1996..2376
DNA (381bp) protein (127aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DPU0_CLOS4
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI98850.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Helix-turn-helix.
L1_007_061G1_scaffold_5_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..3253)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01061.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
sortase, SrtB family
L1_007_061G1_scaffold_5_6
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3250..3558)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01062.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_061G1_scaffold_5_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3548..5209)
DNA (1662bp) protein (554aa)
TraG/TraD family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHJ8_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:EFC98728.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Type IV secretory pathway, VirD4 components
L1_007_061G1_scaffold_5_8
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5525..6610)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01066.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6579..7715)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01067.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7836..8552)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01068.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8563..9141)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01069.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9138..11789)
DNA (2652bp) protein (884aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01070.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12212..12895)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01072.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_061G1_scaffold_5_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12899..14938)
DNA (2040bp) protein (680aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01073.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14968..17253)
DNA (2286bp) protein (762aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01074.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17388..17774)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YUL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ11949.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L1_007_061G1_scaffold_5_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17995..18231)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01076.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_061G1_scaffold_5_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18257..18709)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01077.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_061G1_scaffold_5_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19076..19606)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01078.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19627..19902)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01079.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_061G1_scaffold_5_21
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19932..20486)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01080.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20594..21481)
DNA (888bp) protein (296aa)
ParB-like partition protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X9R1_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:ENZ11945.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ParB-like partition proteins
L1_007_061G1_scaffold_5_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21459..22256)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01084.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ATPases involved in chromosome partitioning
L1_007_061G1_scaffold_5_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22306..22719)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01085.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_061G1_scaffold_5_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22808..24046)
DNA (1239bp) protein (413aa)
SpoIVB peptidase {ECO:0000313|EMBL:EFC99815.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFC99815.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=2 Tax=Clostridium RepID=D3AEG4_9CLOT
L1_007_061G1_scaffold_5_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24300..25322)
DNA (1023bp) protein (341aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEG5_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFC99816.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
oxidoreductase
L1_007_061G1_scaffold_5_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25337..26224)
DNA (888bp) protein (296aa)
Dihydrodipicolinate synthetase family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEG6_9CLOT
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:EFC99817.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
dihydrodipicolinate synthetase
L1_007_061G1_scaffold_5_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26312..28075)
DNA (1764bp) protein (588aa)
Putative dihydroxy-acid dehydratase (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEG8_9CLOT
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:EFC99786.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
dihydroxy-acid and 6-phosphogluconate dehydratase
L1_007_061G1_scaffold_5_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28160..29239)
DNA (1080bp) protein (360aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEG9_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFC99787.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
dehydrogenase
L1_007_061G1_scaffold_5_30
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29268..30422)
DNA (1155bp) protein (385aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FTD2_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EMS73591.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
oxidoreductase domain-containing protein
Displaying items 1-30 of 211 in total

View Taxonomy