ggKbase home page

L1_007_061G1_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_173_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154..2202)
DNA (2049bp) protein (683aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABX0_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFD00688.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
diguanylate cyclase (GGDEF) domain
L1_007_061G1_scaffold_173_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..2589)
DNA (357bp) protein (119aa)
Hpt domain protein n=2 Tax=Clostridium RepID=D3ABX1_9CLOT
Putative Hpt domain protein {ECO:0000313|EMBL:CCZ60619.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
FOG: HPt domain
L1_007_061G1_scaffold_173_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2754..8549)
DNA (5796bp) protein (1932aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABX3_9CLOT
Cell wall-binding repeat protein {ECO:0000313|EMBL:EFD00691.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
S-layer protein
L1_007_061G1_scaffold_173_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8574..9425)
DNA (852bp) protein (284aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ABX4_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ62891.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC-type sugar transport system, permease component
L1_007_061G1_scaffold_173_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9429..10322)
DNA (894bp) protein (298aa)
Sugar ABC transporter permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U192_9CLOT
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCZ62892.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_061G1_scaffold_173_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10425..11813)
DNA (1389bp) protein (463aa)
Putative extracellular solute-binding domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TB78_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFD00694.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC-type sugar transport system, periplasmic component
L1_007_061G1_scaffold_173_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11981..13537)
DNA (1557bp) protein (519aa)
DNA-binding response regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5THX6_9CLOT
DNA-binding response regulator {ECO:0000313|EMBL:CCZ62894.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_061G1_scaffold_173_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13540..15294)
DNA (1755bp) protein (585aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABX8_9CLOT
integral membrane sensor signal transduction histidine kinase
L1_007_061G1_scaffold_173_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15257..17320)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00697.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17503..17769)
DNA (267bp) protein (89aa)
30S ribosomal protein S18 n=3 Tax=Clostridium RepID=D3ABY0_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
30S ribosomal protein S18
L1_007_061G1_scaffold_173_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17815..18249)
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridium RepID=D3ABY1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
single-strand binding protein
L1_007_061G1_scaffold_173_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18290..18577)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=2 Tax=Clostridium RepID=D3ABY2_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S6
L1_007_061G1_scaffold_173_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18564..18683)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00701.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_173_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18731..18928)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00702.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18953..19942)
DNA (990bp) protein (330aa)
Oxidoreductase aldo/keto reductase family n=2 Tax=Clostridium RepID=R5TV87_9CLOT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:CCZ62901.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
aldo/keto reductase
L1_007_061G1_scaffold_173_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20024..20755)
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U1A3_9CLOT
L1_007_061G1_scaffold_173_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20911..21549)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00705.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21618..22670)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00706.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
N-acetyltransferase GCN5
L1_007_061G1_scaffold_173_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22667..23593)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TB39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00707.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23641..24048)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00708.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Zn-finger containing protein
L1_007_061G1_scaffold_173_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24247..25578)
DNA (1332bp) protein (444aa)
Na+ driven multidrug efflux pump n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U1A9_9CLOT
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CCZ62907.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
mate efflux family protein
L1_007_061G1_scaffold_173_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25602..27344)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TB93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62908.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_173_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27427..28332)
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ABZ5_9CLOT
Transmembrane lipoprotein {ECO:0000313|EMBL:CCZ62909.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_061G1_scaffold_173_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28348..29448)
DNA (1101bp) protein (367aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ABZ6_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFD00663.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_061G1_scaffold_173_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29636..31396
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00657.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31401..33179
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00658.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_173_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33262..34779)
DNA (1518bp) protein (506aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABZ9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFD00659.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_061G1_scaffold_173_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34776..36608)
DNA (1833bp) protein (611aa)
Putative two-component sensor kinase YesM n=3 Tax=Clostridium RepID=R5THZ6_9CLOT
Putative two-component sensor kinase YesM {ECO:0000313|EMBL:CCZ62914.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
putative signal transduction protein with a C-terminal ATPase domain
L1_007_061G1_scaffold_173_29
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36967..38148
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33775.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_007_061G1_scaffold_173_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38141..38692
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47610.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy