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L1_007_061G1_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_327_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..254
DNA (252bp) protein (84aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Sporulation factor SpoIIGA n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TGI3_9CLOT
peptidase U4 sporulation factor SpoIIGA
L1_007_061G1_scaffold_327_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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404..1144
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=D3AUY4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_007_061G1_scaffold_327_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1337..1816
DNA (480bp) protein (160aa)
RNA polymerase sigma-70 factor ECF subfamily n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TZU8_9CLOT
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CCZ62367.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_061G1_scaffold_327_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1833..2708
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TTL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62366.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_327_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2962..3444
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5T957_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62365.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RNA polymerase, sigma subunit, SigV
L1_007_061G1_scaffold_327_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3441..4418
DNA (978bp) protein (326aa)
Anti-sigma-V factor RsiV domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARQ5_9CLOT
Anti-sigma-V factor RsiV domain protein {ECO:0000313|EMBL:EFC95502.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Protein of unknown function (DUF3298).
L1_007_061G1_scaffold_327_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4491..4886
DNA (396bp) protein (132aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARQ4_9CLOT
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EFC95501.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_327_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4886..7228
DNA (2343bp) protein (781aa)
Peptidase M56 family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T947_9CLOT
Peptidase M56 family {ECO:0000313|EMBL:CCZ62355.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
peptidase M56 BlaR1
L1_007_061G1_scaffold_327_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7319..8095)
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=D3ARQ1_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_007_061G1_scaffold_327_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8294..9058)
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Type III pantothenate kinase n=2 Tax=Clostridium RepID=D3ARP9_9CLOT
transcriptional activator, Baf family
L1_007_061G1_scaffold_327_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9194..10393
DNA (1200bp) protein (400aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridium RepID=D3ARP8_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CCZ62352.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_061G1_scaffold_327_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10420..11232
DNA (813bp) protein (271aa)
Endo-1 4-beta-xylanase B n=2 Tax=Clostridium RepID=R5TTJ6_9CLOT
Endo-1 4-beta-xylanase B {ECO:0000313|EMBL:CCZ62351.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
acetyl esterase
L1_007_061G1_scaffold_327_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11327..12919
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T941_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
peptide chain release factor 3
L1_007_061G1_scaffold_327_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12948..13400
DNA (453bp) protein (151aa)
YqeY-like protein n=2 Tax=Clostridium RepID=D3ATG1_9CLOT
GatB/Yqey protein {ECO:0000313|EMBL:CCZ62349.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_327_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13434..14837
DNA (1404bp) protein (468aa)
Dipeptidase n=2 Tax=Clostridium RepID=R5T9J5_9CLOT
Dipeptidase {ECO:0000313|EMBL:CCZ62348.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
dipeptidase
L1_007_061G1_scaffold_327_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14964..15056
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TZS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62347.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_061G1_scaffold_327_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15194..16216
DNA (1023bp) protein (341aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter related protein n=3 Tax=Clostridium RepID=R5TTJ1_9CLOT
ABC transporter
L1_007_061G1_scaffold_327_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16206..16871
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Clostridium RepID=R5T935_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCZ62345.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L1_007_061G1_scaffold_327_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17013..17915
DNA (903bp) protein (301aa)
NLPA lipoprotein n=2 Tax=Clostridium RepID=D3AQR4_9CLOT
NLPA lipoprotein {ECO:0000313|EMBL:EFC95849.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
NLPA lipoprotein
L1_007_061G1_scaffold_327_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18152..18790
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95847.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_327_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18790..19617
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95846.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_327_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19681..19941
DNA (261bp) protein (87aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Clostridium RepID=D3AQR0_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EFC95845.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
YlmC/YmxH family sporulation protein
L1_007_061G1_scaffold_327_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20125..20577
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=2 Tax=Clostridium RepID=D3AQQ9_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ATP-cone domain-containing protein
L1_007_061G1_scaffold_327_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20586..21113
DNA (528bp) protein (176aa)
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EFC95843.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFC95843.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
HAD phosphatase, family IIIA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQQ8_9CLOT
HAD superfamily phosphatase
L1_007_061G1_scaffold_327_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21094..21966
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQQ7_9CLOT
L1_007_061G1_scaffold_327_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21963..22475
DNA (513bp) protein (171aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate kinase n=2 Tax=Clostridium RepID=R5TZR7_9CLOT
L1_007_061G1_scaffold_327_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22472..22903
DNA (432bp) protein (144aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Clostridium RepID=D3ATU9_9CLOT
L1_007_061G1_scaffold_327_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23023..23580
DNA (558bp) protein (186aa)
Elongation factor P n=3 Tax=Clostridium RepID=D3ATV0_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
translation elongation factor P
L1_007_061G1_scaffold_327_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23850..25385
DNA (1536bp) protein (512aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQQ5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFC95852.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
AraC family transcriptional regulator
L1_007_061G1_scaffold_327_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25388..27112
DNA (1725bp) protein (575aa)
HAMP domain protein n=2 Tax=Clostridium RepID=D3AQQ4_9CLOT
Sensor histidine kinase {ECO:0000313|EMBL:CCZ62333.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sensor histidine kinase
Displaying items 1-30 of 36 in total

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