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L1_007_061G1_scaffold_392

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_392_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..355)
DNA (354bp) protein (118aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI1_9CLOT
Cell wall-binding repeat protein {ECO:0000313|EMBL:EFD00490.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
cell wall binding repeat-containing protein
L1_007_061G1_scaffold_392_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(382..1614)
DNA (1233bp) protein (411aa)
Choline binding protein A n=3 Tax=Clostridium RepID=R5U345_9CLOT
Choline binding protein A {ECO:0000313|EMBL:CCZ63517.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cell wall binding repeat-containing protein
L1_007_061G1_scaffold_392_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1797..2864)
DNA (1068bp) protein (356aa)
5'-3' exonuclease, SAM domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI4_9CLOT
5'-3' exonuclease, SAM domain protein {ECO:0000313|EMBL:EFD00473.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
5'-3' exonuclease
L1_007_061G1_scaffold_392_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2907..3401)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00474.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_392_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3703..4239)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Clostridium RepID=D3ACI6_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L17
L1_007_061G1_scaffold_392_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4334..5302)
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TD20_9CLOT
DNA-directed RNA polymerase subunit alpha
L1_007_061G1_scaffold_392_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5420..6013)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Clostridium RepID=D3ACI8_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S4
L1_007_061G1_scaffold_392_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6030..6431)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=3 Tax=Clostridium RepID=D9QZN4_CLOSW
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_392_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6551..6919)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Clostridium RepID=D3ACJ0_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S13
L1_007_061G1_scaffold_392_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7246..7464)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Clostridium RepID=D3ACJ1_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
translation initiation factor IF-1
L1_007_061G1_scaffold_392_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7498..7764)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00442.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_392_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7785..8549)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Methionine aminopeptidase n=2 Tax=Clostridium RepID=D3ACJ3_9CLOT
methionine aminopeptidase
L1_007_061G1_scaffold_392_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8553..9197)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Adenylate kinase n=2 Tax=Clostridium RepID=D3ACJ4_9CLOT
adenylate kinase
L1_007_061G1_scaffold_392_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9281..10603)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=2 Tax=Clostridium RepID=D3ACJ5_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
preprotein translocase subunit SecY
L1_007_061G1_scaffold_392_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10605..11045)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Clostridium RepID=D3ACJ6_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L15
L1_007_061G1_scaffold_392_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11071..11253)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=2 Tax=Clostridium RepID=D3ACJ7_9CLOT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
LSU ribosomal protein L30P
L1_007_061G1_scaffold_392_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11267..11776)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Clostridium RepID=D3ACJ8_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
30S ribosomal protein S5
L1_007_061G1_scaffold_392_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11796..12164)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACJ9_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L18
L1_007_061G1_scaffold_392_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12183..12725)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=2 Tax=Clostridium RepID=R5TX40_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L6
L1_007_061G1_scaffold_392_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12792..13193)
DNA (402bp) protein (134aa)
Ribosomal protein S8 n=2 Tax=Clostridium RepID=D3ACK1_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
30S ribosomal protein S8
L1_007_061G1_scaffold_392_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13432..13617)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=18 Tax=Clostridium RepID=D9QZP8_CLOSW
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_061G1_scaffold_392_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13633..14172)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Clostridium RepID=D3ACK3_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L5
L1_007_061G1_scaffold_392_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14194..14499)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=2 Tax=Clostridium RepID=D3ACK4_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L24
L1_007_061G1_scaffold_392_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14513..14881)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Clostridium RepID=D3ACK5_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
50S ribosomal protein L14
L1_007_061G1_scaffold_392_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14908..15162)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=3 Tax=Clostridium RepID=N9VM77_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
30S ribosomal protein S17
L1_007_061G1_scaffold_392_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15285..15491)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Clostridium RepID=D3ACK7_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L29
L1_007_061G1_scaffold_392_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15481..15918)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=3 Tax=Clostridium RepID=N9WW65_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
LSU ribosomal protein L16P
L1_007_061G1_scaffold_392_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15918..16574)
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=2 Tax=Clostridium RepID=D3ACK9_9CLOT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S3
L1_007_061G1_scaffold_392_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16586..16972)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=2 Tax=Clostridium RepID=D3ACL0_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L22
L1_007_061G1_scaffold_392_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17004..17285)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=3 Tax=Clostridium RepID=D3ACL1_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
SSU ribosomal protein S19P
Displaying items 1-30 of 43 in total

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