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L1_007_061G1_scaffold_454

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_454_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(656..910)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XCL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97457.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_061G1_scaffold_454_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1094..1417
DNA (324bp) protein (108aa)
Transcriptional regulator XRE family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TH15_9CLOT
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ62529.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
XRE family transcriptional regulator
L1_007_061G1_scaffold_454_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1560..2276)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T9Y2_9CLOT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_007_061G1_scaffold_454_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2320..3357)
DNA (1038bp) protein (346aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TU86_9CLOT
L1_007_061G1_scaffold_454_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3371..4282)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Ribonuclease Z n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U0B9_9CLOT
ribonuclease Z
L1_007_061G1_scaffold_454_6
unknown

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comp(4366..4674)
DNA (309bp) protein (103aa)

This feature has no annotations

L1_007_061G1_scaffold_454_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4696..4938)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TA38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62533.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_454_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5066..5518)
DNA (453bp) protein (151aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TH19_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ62534.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ribosomal-protein-alanine acetyltransferase
L1_007_061G1_scaffold_454_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5547..6245)
DNA (699bp) protein (233aa)
Peptidase M22 glycoprotease n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T9Y6_9CLOT
Peptidase M22 glycoprotease {ECO:0000313|EMBL:CCZ62535.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
peptidase M22 glycoprotease
L1_007_061G1_scaffold_454_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6242..6670)
DNA (429bp) protein (143aa)
Hydrolase, P-loop family n=2 Tax=Clostridium RepID=D3AK07_9CLOT
ATPase with strong ADP affinity {ECO:0000313|EMBL:CCZ62536.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_454_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6712..7323)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97841.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_454_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7333..9474)
DNA (2142bp) protein (714aa)
Tex-like protein N-terminal domain protein n=2 Tax=Clostridium RepID=D3AK09_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EFC97842.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Tex-like protein
L1_007_061G1_scaffold_454_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9725..10675
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97844.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
conserved hypothetical protein (putative transposase or invertase)
L1_007_061G1_scaffold_454_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10816..11202
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AK12_9CLOT
Na+/solute symporter {ECO:0000313|EMBL:CCZ62540.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_454_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11303..11707)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97846.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_454_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11682..12890)
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Aspartokinase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TB36_9CLOT
aspartate kinase
L1_007_061G1_scaffold_454_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12959..14173)
DNA (1215bp) protein (405aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Homoserine dehydrogenase n=2 Tax=Clostridium RepID=D3AK15_9CLOT
homoserine dehydrogenase
L1_007_061G1_scaffold_454_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14179..14622)
DNA (444bp) protein (148aa)
UPF0735 ACT domain-containing protein CLOSTHATH_03959 n=3 Tax=Clostridium RepID=D3AK16_9CLOT
UPF0735 ACT domain-containing protein BN544_00824 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
amino acid-binding ACT protein
L1_007_061G1_scaffold_454_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14751..15767)
DNA (1017bp) protein (339aa)
Peptide chain release factor 2 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TV32_9CLOT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_454_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15992..18562)
DNA (2571bp) protein (857aa)
Protein translocase subunit SecA n=2 Tax=Clostridium RepID=D3AK20_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Preprotein translocase subunit SecA
L1_007_061G1_scaffold_454_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18657..18833)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97825.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_454_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19216..19743
DNA (528bp) protein (176aa)
Ribosomal subunit interface protein n=3 Tax=Clostridium RepID=D3AK23_9CLOT
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCZ62863.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ribosomal subunit interface protein
L1_007_061G1_scaffold_454_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19829..20749)
DNA (921bp) protein (307aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EFC97828.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EFC97828.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Thioredoxin-disulfide reductase n=2 Tax=Clostridium RepID=D3AK24_9CLOT
thioredoxin reductase
L1_007_061G1_scaffold_454_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21018..21749
DNA (732bp) protein (244aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridium RepID=D3AK25_9CLOT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFC97829.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
short-chain dehydrogenase/reductase SDR
L1_007_061G1_scaffold_454_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21803..22867)
DNA (1065bp) protein (355aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK26_9CLOT
Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family {ECO:0000313|EMBL:EFC97830.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_454_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22867..24246)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=2 Tax=Clostridium RepID=D3AK27_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCZ62867.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
NorM, Na+-driven multidrug efflux pump
L1_007_061G1_scaffold_454_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24247..24693)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=D3AK28_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ62868.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
MarR family transcriptional regulator
L1_007_061G1_scaffold_454_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24858..25427)
DNA (570bp) protein (190aa)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK29_9CLOT
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EFC97833.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
class II aldolase/adducin family protein
Displaying 28 items

View Taxonomy