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L1_007_061G1_scaffold_455

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_455_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(373..5013)
DNA (4641bp) protein (1547aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA polymerase III polC-type n=4 Tax=Clostridium RepID=R5T8I2_9CLOT
DNA polymerase III subunit alpha
L1_007_061G1_scaffold_455_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5050..6108)
DNA (1059bp) protein (353aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T1R1_9CLOT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L1_007_061G1_scaffold_455_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6164..7222)
DNA (1059bp) protein (353aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Membrane-associated zinc metalloprotease n=3 Tax=Clostridium RepID=R5TRD5_9CLOT
membrane-associated zinc metalloprotease
L1_007_061G1_scaffold_455_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7224..8366)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Clostridium RepID=D3AKV6_9CLOT
L1_007_061G1_scaffold_455_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8420..9220)
DNA (801bp) protein (267aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Phosphatidate cytidylyltransferase n=2 Tax=Clostridium RepID=D3AKV7_9CLOT
phosphatidate cytidylyltransferase
L1_007_061G1_scaffold_455_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9240..10061)
DNA (822bp) protein (274aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Clostridium RepID=D3AKV8_9CLOT
L1_007_061G1_scaffold_455_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10119..10673)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=2 Tax=Clostridium RepID=D3AKV9_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ribosome recycling factor
L1_007_061G1_scaffold_455_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10688..11389)
DNA (702bp) protein (234aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Uridylate kinase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T8H1_9CLOT
uridylate kinase
L1_007_061G1_scaffold_455_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11580..13289)
DNA (1710bp) protein (570aa)
Extracellular solute-binding protein family 5 n=3 Tax=Clostridium RepID=R5TKF2_9CLOT
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCZ59441.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
family 5 extracellular solute-binding protein
L1_007_061G1_scaffold_455_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13403..14383)
DNA (981bp) protein (327aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AKW4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFC97542.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_007_061G1_scaffold_455_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14380..15399)
DNA (1020bp) protein (340aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=3 Tax=Clostridium RepID=R5T074_9CLOT
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:CCZ59440.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_007_061G1_scaffold_455_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15415..16455)
DNA (1041bp) protein (347aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3AKW7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC97535.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L1_007_061G1_scaffold_455_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16470..17387)
DNA (918bp) protein (306aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3AKW8_9CLOT
Oligopeptide ABC transporter permease protein OppB {ECO:0000313|EMBL:CCZ59436.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L1_007_061G1_scaffold_455_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17684..18607)
DNA (924bp) protein (308aa)
Elongation factor Ts n=2 Tax=Clostridium RepID=D3AKW9_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
translation elongation factor Ts
L1_007_061G1_scaffold_455_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18794..19534)
DNA (741bp) protein (247aa)
30S ribosomal protein S2 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AKX0_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
30S ribosomal protein S2
L1_007_061G1_scaffold_455_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19769..20584)
DNA (816bp) protein (272aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=2 Tax=Clostridium RepID=D3AKX1_9CLOT
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
GTP-sensing pleiotropic transcriptional repressor CodY
L1_007_061G1_scaffold_455_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20710..22788)
DNA (2079bp) protein (693aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TRA5_9CLOT
L1_007_061G1_scaffold_455_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22803..23903)
DNA (1101bp) protein (367aa)
DNA protecting protein DprA (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AKX4_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:EFC97533.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
DNA protecting protein DprA
L1_007_061G1_scaffold_455_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23890..25422)
DNA (1533bp) protein (511aa)
Mg chelatase-like protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T049_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:CCZ59410.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Mg chelatase subunit ChlI
Displaying 19 items

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