ggKbase home page

L1_007_061G1_scaffold_562

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_562_1
unknown

Not on your lists

427..756
DNA (330bp) protein (110aa)

This feature has no annotations

L1_007_061G1_scaffold_562_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

933..2072
DNA (1140bp) protein (380aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH1_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFC99745.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
putative diguanylate kinase signaling protein
L1_007_061G1_scaffold_562_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2094..3146)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99746.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator, LacI family
L1_007_061G1_scaffold_562_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3427..4800
DNA (1374bp) protein (458aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH3_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFC99747.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_061G1_scaffold_562_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4817..5689
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium hathewayi RepID=D3AEH4_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC99748.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC transporter permease
L1_007_061G1_scaffold_562_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5689..6552
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC99749.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_061G1_scaffold_562_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6623..7942
DNA (1320bp) protein (440aa)
beta-fructofuranosidase (EC:3.2.1.26)
Glycosyl hydrolase family 32 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH6_9CLOT
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EFC99750.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_562_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7944..9830
DNA (1887bp) protein (629aa)
Glycosidases (EC:2.4.1.4)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH7_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFC99751.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_061G1_scaffold_562_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9885..10115)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D3AEH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99752.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_562_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10339..11880
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99753.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_061G1_scaffold_562_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11932..13488
DNA (1557bp) protein (519aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEI0_9CLOT
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFC99754.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Orn/Lys/Arg decarboxylase major region
L1_007_061G1_scaffold_562_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13492..14085
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99755.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
guanylate kinase
L1_007_061G1_scaffold_562_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14116..14961
DNA (846bp) protein (282aa)
Polysaccharide deacetylase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEI2_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:EFC99756.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
polysaccharide deacetylase
L1_007_061G1_scaffold_562_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15174..16163
DNA (990bp) protein (330aa)
DNA polymerase III, delta' subunit n=2 Tax=Clostridium RepID=D3AEI4_9CLOT
ATPase {ECO:0000313|EMBL:CCZ57849.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA polymerase III subunit delta'
L1_007_061G1_scaffold_562_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16167..17075
DNA (909bp) protein (303aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=D3AEI5_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EFC99759.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
PSP1 domain-containing protein
L1_007_061G1_scaffold_562_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17065..17802
DNA (738bp) protein (246aa)
Methyltransferase domain protein n=2 Tax=Clostridium RepID=D3AEI6_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EFC99760.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
type 11 methyltransferase
L1_007_061G1_scaffold_562_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..18710
DNA (912bp) protein (304aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
S-adenosylmethionine-dependent methyltransferase, YraL family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEI7_9CLOT
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L1_007_061G1_scaffold_562_18
unknown

Not on your lists

18720..18884
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_061G1_scaffold_562_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18805..19227)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AEI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ57853.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_061G1_scaffold_562_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19371..19922)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AEI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99763.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Putative transposase, YhgA-like.
Displaying 20 items

View Taxonomy