ggKbase home page

L1_007_122G1_scaffold_1064

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_1064_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36..1718)
DNA (1683bp) protein (561aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Lysine--tRNA ligase n=8 Tax=Bifidobacterium RepID=B3DQI4_BIFLD
lysyl-tRNA synthetase
L1_007_122G1_scaffold_1064_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2219..3409
DNA (1191bp) protein (397aa)
Arabinose efflux permease n=10 Tax=Bifidobacterium RepID=B3DQI3_BIFLD
major facilitator superfamily protein
Arabinose efflux permease {ECO:0000313|EMBL:ACD99221.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_1064_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3496..5637
DNA (2142bp) protein (714aa)
Tetratricopeptide repeat protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQX7_BIFBR
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFE88622.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00616.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein with TPR domain
L1_007_122G1_scaffold_1064_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5713..6246
DNA (534bp) protein (178aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=Q8G3V3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD95610.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_122G1_scaffold_1064_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6469..7980)
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASK3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI96824.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_122G1_scaffold_1064_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8089..8796)
DNA (708bp) protein (236aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=V6XY99_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70030.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_122G1_scaffold_1064_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8826..9893)
DNA (1068bp) protein (356aa)
PspC domain-containing protein n=3 Tax=Bifidobacterium RepID=E5XX67_9BIFI
hypothetical protein
PspC domain-containing protein {ECO:0000313|EMBL:EFV37787.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_122G1_scaffold_1064_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10673..11920
DNA (1248bp) protein (416aa)
Putative signal transduction histidine kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN74_BIFLS
Putative signal transduction histidine kinase {ECO:0000313|EMBL:KFI73671.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
signal transduction histidine kinase
L1_007_122G1_scaffold_1064_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11917..12612
DNA (696bp) protein (232aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=14 Tax=Bacteria RepID=D6DC12_BIFLN
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAJ71824.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_122G1_scaffold_1064_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12660..13682)
DNA (1023bp) protein (341aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
GalE1 n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MX85_9BIFI
UDP-glucose 4-epimerase LnpD {ECO:0000313|EMBL:BAP84215.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_122G1_scaffold_1064_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13751..15157)
DNA (1407bp) protein (469aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
galT2; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B732_BIFLN
L1_007_122G1_scaffold_1064_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15154..16266)
DNA (1113bp) protein (371aa)
Putative desulfatase possibly for mucin n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDE6_9BIFI
mucin desulfatase
Putative desulfatase possibly for mucin {ECO:0000313|EMBL:CCY95187.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_1064_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16295..18550)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW61_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:ADH01117.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
hypothetical protein
L1_007_122G1_scaffold_1064_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18767..19459)
DNA (693bp) protein (231aa)
Permease of ABC transporter for sugars n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW62_BIFLJ
ABC transporter permease
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KFI73665.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying 14 items

View Taxonomy