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L1_007_122G1_scaffold_1070

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_1070_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..263)
DNA (261bp) protein (87aa)
fucO; Lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=5 Tax=Bifidobacterium breve RepID=F6C6R9_BIFBA
Lactaldehyde reductase {ECO:0000313|EMBL:EPD75840.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_1070_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

703..2007
DNA (1305bp) protein (435aa)
Cyclopropane fatty acid synthase and related methyltransferases n=13 Tax=Bifidobacterium RepID=D6DBW4_BIFLN
cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KEY21514.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_1070_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2426..3457)
DNA (1032bp) protein (344aa)
UDP-glucose 4-epimerase n=14 Tax=Bifidobacterium RepID=B3DQZ8_BIFLD
UDP-glucose 4-epimerase
GalE2 {ECO:0000313|EMBL:ACB15397.1}; UDP-glucose 4-epimerase GalE {ECO:0000313|EMBL:BAP84183.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_122G1_scaffold_1070_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3785..4645
DNA (861bp) protein (287aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
tRNA (guanine-N(7)-)-methyltransferase n=7 Tax=Bifidobacterium RepID=TRMB_BIFLO
s-adenosylmethionine-dependent methyltransferase
L1_007_122G1_scaffold_1070_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5082..5885
DNA (804bp) protein (268aa)
Hypothetical branched-chain amino acid permease n=2 Tax=Bifidobacterium longum RepID=B3DQK0_BIFLD
azlC; branched-chain amino acid permease
Hypothetical branched-chain amino acid permease {ECO:0000313|EMBL:ACD99238.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_1070_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5882..6214
DNA (333bp) protein (111aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=18 Tax=Bifidobacterium RepID=D6DBY9_BIFLN
branched-chain amino acid transport protein
Branched-chain amino acid transporter {ECO:0000313|EMBL:EFV37887.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_122G1_scaffold_1070_7
unknown

Not on your lists

comp(6161..6382)
DNA (222bp) protein (74aa)

This feature has no annotations

L1_007_122G1_scaffold_1070_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6393..6911)
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=18 Tax=Bifidobacterium RepID=B3DQJ8_BIFLD
phosphatase
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AIW44205.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_1070_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7035..7697)
DNA (663bp) protein (221aa)
Dihydrofolate reductase n=11 Tax=Bifidobacterium RepID=B3DQJ7_BIFLD
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:BAJ67264.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_122G1_scaffold_1070_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7807..8679)
DNA (873bp) protein (291aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Thymidylate synthase n=2 Tax=Bifidobacterium RepID=E8MVK9_BIFL1
thymidylate synthase
L1_007_122G1_scaffold_1070_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8807..9220
DNA (414bp) protein (138aa)
OsmC family protein n=20 Tax=Bifidobacterium RepID=B7GUQ8_BIFLS
hypothetical protein
OsmC family protein {ECO:0000313|EMBL:ACJ53204.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_122G1_scaffold_1070_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9279..10316)
DNA (1038bp) protein (346aa)
Universal stress protein n=17 Tax=Bifidobacterium RepID=B3DQJ4_BIFLD
hypothetical protein
Universal stress protein {ECO:0000313|EMBL:BAP84191.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_122G1_scaffold_1070_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10798..11082)
DNA (285bp) protein (95aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2U3_BIFLN
Peptidase P60 {ECO:0000313|EMBL:KHD95622.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_007_122G1_scaffold_1070_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11237..11881)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N3C4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96424.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
spr1; spr1
L1_007_122G1_scaffold_1070_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12196..13152)
DNA (957bp) protein (319aa)
Surface antigen protein n=14 Tax=Bifidobacterium longum RepID=B3DQJ1_BIFLD
hypothetical protein
CHAP domain protein {ECO:0000313|EMBL:EEI80750.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_122G1_scaffold_1070_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13546..14688
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Phosphoserine aminotransferase n=13 Tax=Bifidobacterium RepID=B3DQJ0_BIFLD
phosphoserine aminotransferase
L1_007_122G1_scaffold_1070_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14813..15073
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=Q8G3U6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96421.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_1070_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15198..16283)
DNA (1086bp) protein (362aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Histidine kinase sensor of two component system n=10 Tax=Bifidobacterium longum RepID=Q8G3U7_BIFLO
two-component sensor kinase
L1_007_122G1_scaffold_1070_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16582..17256
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=13 Tax=Bifidobacterium longum RepID=B3DQI7_BIFLD
phoU; phou
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_122G1_scaffold_1070_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17617..18231)
DNA (615bp) protein (205aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=21 Tax=Bifidobacterium RepID=GPMA_BIFLD
phosphoglyceromutase
Displaying 20 items

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