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L1_007_122G1_scaffold_1159

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_1159_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2K3_BIFLN
helicase
AAA domain protein {ECO:0000313|EMBL:EIJ28314.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_122G1_scaffold_1159_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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294..3749
DNA (3456bp) protein (1152aa)
Restriction endonuclease n=5 Tax=Bifidobacterium RepID=B3DR64_BIFLD
mcrA; restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ACD99347.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_1159_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3753..4658
DNA (906bp) protein (302aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
CRISPR-associated endonuclease Cas1 n=9 Tax=Bifidobacterium RepID=F8ATC5_BIFLN
hypothetical protein
L1_007_122G1_scaffold_1159_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4655..4987
DNA (333bp) protein (111aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
CRISPR-associated endoribonuclease Cas2 n=2 Tax=Bifidobacterium RepID=B3DR66_BIFLD
hypothetical protein
L1_007_122G1_scaffold_1159_5
unknown

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5763..5897
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_6
unknown

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5956..6090
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_7
unknown

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6725..6859
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_8
unknown

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7174..7308
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_9
unknown

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7356..7490
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_10
unknown

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8400..8567
DNA (168bp) protein (56aa)

This feature has no annotations

L1_007_122G1_scaffold_1159_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9290..10753
DNA (1464bp) protein (488aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Proline--tRNA ligase n=3 Tax=Bifidobacterium RepID=B3DR68_BIFLD
proS; prolyl-tRNA synthetase
L1_007_122G1_scaffold_1159_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11029..11766
DNA (738bp) protein (246aa)
SSB3 n=9 Tax=Bifidobacterium RepID=E4R3W0_BIFLM
ssb3; ssb3
Single-strand binding family protein {ECO:0000313|EMBL:EIJ28354.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_122G1_scaffold_1159_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11849..13864)
DNA (2016bp) protein (672aa)
endothelin-converting enzyme . Metallo peptidase. MEROPS family M13 (EC:3.4.24.71 3.4.24.-)
Zinc metalloprotease n=1 Tax=Bifidobacterium longum E18 RepID=V6XXV1_BIFLN
Peptidase M13 {ECO:0000313|EMBL:KEY33491.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_122G1_scaffold_1159_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14052..15032
DNA (981bp) protein (327aa)
Uncharacterized conserved protein n=14 Tax=Bacteria RepID=D6DBQ6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44152.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_1159_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15222..16004
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Methionine aminopeptidase n=16 Tax=Bacteria RepID=F8ATD2_BIFLN
methionine aminopeptidase
L1_007_122G1_scaffold_1159_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16278..17570
DNA (1293bp) protein (431aa)
Citrate synthase n=15 Tax=Bifidobacterium RepID=D6ZVV1_BIFLJ
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_1159_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17784..18803)
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=14 Tax=Bifidobacterium RepID=DAPD_BIFLO
hypothetical protein
L1_007_122G1_scaffold_1159_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18903..19052
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C2GVL1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71722.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_122G1_scaffold_1159_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19037..20122)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=Q8G3M3_BIFLO
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:AIW44148.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying 19 items

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