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L1_007_122G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 970 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_0_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20..859
DNA (840bp) protein (280aa)
Sporulation transcription factor Spo0A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAU2_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
spo0A; Stage 0 sporulation protein A
L1_007_122G1_scaffold_0_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1340..2455
DNA (1116bp) protein (372aa)
Thiamin pyrophosphokinase, catalytic domain protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAU1_9FIRM
Thiamin pyrophosphokinase, catalytic domain protein {ECO:0000313|EMBL:EDQ96479.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
pyrophosphokinase
L1_007_122G1_scaffold_0_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2473..3348
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96478.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_0_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3379..4068
DNA (690bp) protein (230aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDQ96477.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDQ96477.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridiales RepID=B0AAT9_9FIRM
glycosyltransferase
L1_007_122G1_scaffold_0_5

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4073..4936
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ16778.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glycosyltransferase
L1_007_122G1_scaffold_0_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4941..6017
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96475.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_0_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6010..6540
DNA (531bp) protein (177aa)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=B0AAT6_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CDA11404.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ADP-ribose pyrophosphatase
L1_007_122G1_scaffold_0_8

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6609..7202
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16775.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_0_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7214..8101
DNA (888bp) protein (296aa)
Phage integrase SAM-like domain protein n=2 Tax=Clostridiales RepID=B0AAT4_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:CDA11402.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
xerD1; tyrosine recombinase
L1_007_122G1_scaffold_0_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8275..9345
DNA (1071bp) protein (357aa)
YceG family protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAT3_9FIRM
YceG family protein {ECO:0000313|EMBL:EDQ96471.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
exported aminodeoxychorismate lyase
L1_007_122G1_scaffold_0_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9423..10094
DNA (672bp) protein (224aa)
putative O-methyltransferase (EC:2.1.1.-)
UPI0003D5BC85 related cluster n=1 Tax=unknown RepID=UPI0003D5BC85
O-methyltransferase {ECO:0000313|EMBL:EDQ96470.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_122G1_scaffold_0_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10087..11013
DNA (927bp) protein (309aa)
UPI0003D64F5C related cluster n=1 Tax=unknown RepID=UPI0003D64F5C
Uncharacterized protein {ECO:0000313|EMBL:ETI95678.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
U32 family peptidase
L1_007_122G1_scaffold_0_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11123..12784
DNA (1662bp) protein (554aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAT0_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDQ96468.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative penicillin-binding protein
L1_007_122G1_scaffold_0_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12927..13631
DNA (705bp) protein (235aa)
RNA polymerase sigma factor n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAS9_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sigK; Sigma K
L1_007_122G1_scaffold_0_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13864..16209
DNA (2346bp) protein (782aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRG2_9CLOT
sensor histidine kinase
L1_007_122G1_scaffold_0_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16255..18501
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X999_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11395.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
sensor histidine kinase
L1_007_122G1_scaffold_0_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18608..18955
DNA (348bp) protein (116aa)
UPI0003D68215 related cluster n=1 Tax=unknown RepID=UPI0003D68215
Uncharacterized protein {ECO:0000313|EMBL:ETI91176.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L1_007_122G1_scaffold_0_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18939..19565
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96461.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_0_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19585..20004
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3X1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11392.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_0_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20001..20552
DNA (552bp) protein (184aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=3 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAS1_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EDQ96459.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein
L1_007_122G1_scaffold_0_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20930..21817)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X994_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:CDA11390.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_0_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22073..22912
DNA (840bp) protein (280aa)
AP endonuclease, family 2 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95698.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Xylose isomerase-like TIM barrel.
L1_007_122G1_scaffold_0_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23077..25002
DNA (1926bp) protein (642aa)
UPI0003D6367A related cluster n=1 Tax=unknown RepID=UPI0003D6367A
Uncharacterized protein {ECO:0000313|EMBL:ETI95697.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
oxidoreductase
L1_007_122G1_scaffold_0_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25151..26020
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
aroE2; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=2 Tax=Clostridiales RepID=B0AAR7_9FIRM
L1_007_122G1_scaffold_0_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26197..27429
DNA (1233bp) protein (411aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR6_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDQ96454.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_0_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28016..28882
DNA (867bp) protein (289aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Shikimate dehydrogenase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR5_9FIRM
shikimate 5-dehydrogenase
L1_007_122G1_scaffold_0_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29103..31115)
DNA (2013bp) protein (671aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDQ96452.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_007_122G1_scaffold_0_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31486..32373
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6S6_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:CDA11383.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator
L1_007_122G1_scaffold_0_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32509..33297
DNA (789bp) protein (263aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR2_9FIRM
L1_007_122G1_scaffold_0_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33618..34397
DNA (780bp) protein (260aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAR1_9FIRM
Displaying items 1-30 of 970 in total

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