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L1_007_122G1_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 486 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_6_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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240..1640
DNA (1401bp) protein (467aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TUP0_9CLOT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCZ60617.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_6_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1657..2592
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ABW8_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ60616.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter permease
L1_007_122G1_scaffold_6_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2592..3431
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T3X1_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ60615.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_6_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3461..4558
DNA (1098bp) protein (366aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABW6_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFD00684.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Gfo/Idh/MocA family oxidoreductase
L1_007_122G1_scaffold_6_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4563..5459
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABW5_9CLOT
Putative dehydrogenase {ECO:0000313|EMBL:CCZ60613.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
oxidoreductase domain-containing protein
L1_007_122G1_scaffold_6_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5477..6559
DNA (1083bp) protein (361aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABW4_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFD00682.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
oxidoreductase
L1_007_122G1_scaffold_6_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6628..8313
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABW3_9CLOT
integral membrane sensor signal transduction histidine kinase
L1_007_122G1_scaffold_6_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8310..9839
DNA (1530bp) protein (510aa)
DNA-binding response regulator AraC family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T3W6_9CLOT
DNA-binding response regulator AraC family {ECO:0000313|EMBL:CCZ60610.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_6_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9950..11074)
DNA (1125bp) protein (375aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EFD00679.1}; EC=3.2.1.- {ECO:0000313|EMBL:EFD00679.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Glycosyl hydrolase, family 88 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABW1_9CLOT
Glycoside Hydrolase Family 105-like unsaturated rhamnogalacturonyl hydrolase
L1_007_122G1_scaffold_6_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11180..12070
DNA (891bp) protein (297aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=D3ABW0_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ60608.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LacI family transcriptional regulator
L1_007_122G1_scaffold_6_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12121..13428)
DNA (1308bp) protein (436aa)
TRAP dicarboxylate transporter DctM subunit n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TUN3_9CLOT
TRAP dicarboxylate transporter DctM subunit {ECO:0000313|EMBL:CCZ60607.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_6_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13429..13896)
DNA (468bp) protein (156aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Clostridium RepID=D3ABV8_9CLOT
C4-dicarboxylate transport system permease small protein {ECO:0000313|EMBL:CCZ60606.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_6_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13899..14927)
DNA (1029bp) protein (343aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABV7_9CLOT
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EFD00675.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_6_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15210..17432
DNA (2223bp) protein (741aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA topoisomerase 3 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBG6_9CLOT
DNA topoisomerase III
L1_007_122G1_scaffold_6_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17621..18838
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TNM4_9CLOT
L1_007_122G1_scaffold_6_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19088..20818
DNA (1731bp) protein (577aa)
Carbon starvation-induced protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T3V8_9CLOT
Carbon starvation-induced protein {ECO:0000313|EMBL:CCZ60600.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
carbon starvation protein CstA
L1_007_122G1_scaffold_6_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20834..21343)
DNA (510bp) protein (170aa)
Transcriptional regulator, effector binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABV1_9CLOT
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:EFD00669.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_6_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21384..21857)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60598.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_6_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21880..22743)
DNA (864bp) protein (288aa)
Transcriptional regulator, effector binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABU9_9CLOT
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:EFD00667.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator
L1_007_122G1_scaffold_6_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22965..23351
DNA (387bp) protein (129aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=D3ABU8_9CLOT
Putative response regulator receiver domain protein {ECO:0000313|EMBL:CCZ60596.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
SARP family transcriptional regulator
L1_007_122G1_scaffold_6_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23375..24139
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T3V4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60595.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Domain of unknown function (DUF303).
L1_007_122G1_scaffold_6_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24151..24999)
DNA (849bp) protein (283aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBG0_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ60594.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transcriptional regulator, AraC family
L1_007_122G1_scaffold_6_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25288..26598
DNA (1311bp) protein (437aa)
Putative sugar ABC transporter sugar-binding protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T4Z8_9CLOT
Putative sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:CCZ60593.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
extracellular solute-binding protein
L1_007_122G1_scaffold_6_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26626..27537
DNA (912bp) protein (304aa)
Sugar ABC transporter permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TUM2_9CLOT
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCZ60592.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_122G1_scaffold_6_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27555..28379
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3AAL9_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ60591.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_122G1_scaffold_6_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28428..29102
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T3U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60590.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Predicted integral membrane protein
L1_007_122G1_scaffold_6_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29138..31330
DNA (2193bp) protein (731aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBF7_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:CCZ60589.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_6_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31606..32103
DNA (498bp) protein (166aa)
Putative NADP-reducing hydrogenase subunit A n=2 Tax=Clostridium RepID=R5T4Z6_9CLOT
Putative NADP-reducing hydrogenase subunit A {ECO:0000313|EMBL:CCZ60588.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_6_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32290..34350
DNA (2061bp) protein (687aa)
DHHA1 domain protein n=2 Tax=Clostridium RepID=D3AAL4_9CLOT
DHH subfamily 1 protein {ECO:0000313|EMBL:CCZ60587.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
phosphoesterase RecJ domain-containing protein
L1_007_122G1_scaffold_6_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


34350..34796
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TNL6_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LSU ribosomal protein L9P
Displaying items 1-30 of 486 in total

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