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L1_007_122G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_12_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..418
DNA (417bp) protein (139aa)
SH3 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDC9_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDA10394.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
CHAP domain containing protein
L1_007_122G1_scaffold_12_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(521..1426)
DNA (906bp) protein (302aa)
Acetamidase/Formamidase family protein n=2 Tax=Clostridiales RepID=B0A6Z2_9FIRM
Acetamidase/Formamidase family protein {ECO:0000313|EMBL:CDA10395.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
acetamidase
L1_007_122G1_scaffold_12_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1581..3536)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10396.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_12_4

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comp(3599..5707)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16816.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_12_5

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5885..6457
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16815.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_12_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6565..7938)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDQ97750.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
drug/sodium antiporter
L1_007_122G1_scaffold_12_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8129..10903)
DNA (2775bp) protein (925aa)
E1-E2 ATPase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y7_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:EDQ97749.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cation-transporting ATPase
L1_007_122G1_scaffold_12_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11137..11334)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95712.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_007_122G1_scaffold_12_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11558..12529)
DNA (972bp) protein (324aa)
Putative DNA protecting protein DprA n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDE1_9CLOT
Putative DNA protecting protein DprA {ECO:0000313|EMBL:CDA10404.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA processing protein DprA
L1_007_122G1_scaffold_12_10

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comp(12616..14073)
DNA (1458bp) protein (486aa)
Cell wall protein V n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6H9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ18237.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_12_11
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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14188..14751
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI81187.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
L1_007_122G1_scaffold_12_12
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14556..15143)
DNA (588bp) protein (196aa)
Phosphate butyryltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9S9_9FIRM
Phosphate butyryltransferase {ECO:0000313|EMBL:KHS55616.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
ptb; phosphate butyryltransferase
L1_007_122G1_scaffold_12_13
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15157..16230)
DNA (1074bp) protein (358aa)
buk; branched-chain fatty-acid kinase (EC:2.7.2.-)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Probable butyrate kinase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWR8_CLOSD
L1_007_122G1_scaffold_12_14
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16253..17155)
DNA (903bp) protein (301aa)
NADH dependant phenylglyoxylate n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWR7_CLOSD
NADH dependant phenylglyoxylate (fragment)
NADH dependant phenylglyoxylate {ECO:0000313|EMBL:CBH20882.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L1_007_122G1_scaffold_12_15
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17187..18365)
DNA (1179bp) protein (393aa)
porA; Pyruvate synthase subunit porA (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha) (EC:1.2.7.1)
Pyruvate synthase subunit porA (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha) {ECO:0000313|EMBL:CBH20881.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBH20881.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Pyruvate synthase subunit porA (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha) n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWR6_CLOSD
L1_007_122G1_scaffold_12_16
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18365..18625)
DNA (261bp) protein (87aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit (Modular protein) n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWR5_CLOSD
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit (modular protein)
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit (Modular protein) {ECO:0000313|EMBL:CBH20880.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L1_007_122G1_scaffold_12_17
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18694..19239)
DNA (546bp) protein (182aa)
porC; Pyruvate synthase subunit porC (Pyruvate oxidoreductase gamma chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit gamma) (EC:1.2.7.1)
Pyruvate synthase subunit porC (Pyruvate oxidoreductase gamma chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit gamma) {ECO:0000313|EMBL:CBH20879.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBH20879.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Pyruvate synthase subunit porC (Pyruvate oxidoreductase gamma chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit gamma) n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWR4_CLOSD
L1_007_122G1_scaffold_12_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19487..20251
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YY44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12657.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator, IclR family
L1_007_122G1_scaffold_12_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20380..21846)
DNA (1467bp) protein (489aa)
UPI0003D5F9AB related cluster n=1 Tax=unknown RepID=UPI0003D5F9AB
Uncharacterized protein {ECO:0000313|EMBL:ETI92391.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L1_007_122G1_scaffold_12_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21850..22986)
DNA (1137bp) protein (379aa)
UPI0003D5BAA7 related cluster n=1 Tax=unknown RepID=UPI0003D5BAA7
Uncharacterized protein {ECO:0000313|EMBL:ETI92392.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
putative ATPase
L1_007_122G1_scaffold_12_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23081..23884)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97744.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_12_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24159..24737)
DNA (579bp) protein (193aa)
50S ribosomal protein L25 n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y1_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_12_23
unknown

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24799..24981
DNA (183bp) protein (61aa)

This feature has no annotations

L1_007_122G1_scaffold_12_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25041..25526
DNA (486bp) protein (162aa)
HD domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Y0_9FIRM
HD domain protein {ECO:0000313|EMBL:EDQ97742.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_12_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25679..28489)
DNA (2811bp) protein (937aa)
Helicase C-terminal domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6X9_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EDQ97741.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Protein of unknown function DUF3427
L1_007_122G1_scaffold_12_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28700..30259)
DNA (1560bp) protein (520aa)
UPI0003D5B4F4 related cluster n=1 Tax=unknown RepID=UPI0003D5B4F4
Uncharacterized protein {ECO:0000313|EMBL:ETI93260.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein DUF1703
L1_007_122G1_scaffold_12_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30466..30924)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97739.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_12_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30906..31478)
DNA (573bp) protein (191aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases (EC:4.1.1.-)
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6X6_9FIRM
L1_007_122G1_scaffold_12_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31565..33034)
DNA (1470bp) protein (490aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6X5_9FIRM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:EDQ97737.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_122G1_scaffold_12_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33314..34192
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6X4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDQ97736.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
LysR family transcriptional regulator
Displaying items 1-30 of 260 in total

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