ggKbase home page

L1_007_122G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_27_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

L1_007_122G1_scaffold_27_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(87..872)
DNA (786bp) protein (262aa)
Transcriptional regulator, LacI family n=5 Tax=Erysipelotrichaceae RepID=B0N4Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90026.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_122G1_scaffold_27_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1027..2172
DNA (1146bp) protein (382aa)
Transporter, major facilitator family protein n=2 Tax=Erysipelotrichaceae RepID=B0N4Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90025.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
major facilitator superfamily transporter
L1_007_122G1_scaffold_27_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2222..5692)
DNA (3471bp) protein (1157aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4Y7_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDS18739.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_122G1_scaffold_27_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6022..7527)
DNA (1506bp) protein (502aa)
Glycosyl hydrolase, family 1 n=5 Tax=Erysipelotrichaceae RepID=B0N4Y6_9FIRM
Glycosyl hydrolase family 1 {ECO:0000313|EMBL:CCZ31502.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
L1_007_122G1_scaffold_27_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7530..8861)
DNA (1332bp) protein (444aa)
PTS system, lactose/cellobiose family IIC component n=5 Tax=Erysipelotrichaceae RepID=B0N4Y5_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system, lactose/cellobiose family IIC component
L1_007_122G1_scaffold_27_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9157..11079)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R559_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90021.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
bglB; transcriptional antiterminator BglB
L1_007_122G1_scaffold_27_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11968..12834)
DNA (867bp) protein (289aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N4Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36608.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_122G1_scaffold_27_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12942..13826
DNA (885bp) protein (295aa)
Radical SAM domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4Y1_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDS18733.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
radical SAM protein
L1_007_122G1_scaffold_27_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14176..15654)
DNA (1479bp) protein (493aa)
Glycosyl hydrolase, family 1 n=4 Tax=Erysipelotrichaceae RepID=B0N4Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36607.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycoside hydrolase
L1_007_122G1_scaffold_27_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15658..17049)
DNA (1392bp) protein (464aa)
PTS system beta-glucoside-specific EIIBCA component n=3 Tax=Erysipelotrichaceae RepID=B0N4X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47460.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ascF; PTS system beta-glucosides-specific iiABC component
L1_007_122G1_scaffold_27_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17131..18000)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RPC3_9FIRM
PRD domain protein {ECO:0000313|EMBL:CCZ36605.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
beta-glucoside operon antiterminator
L1_007_122G1_scaffold_27_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18016..18483)
DNA (468bp) protein (156aa)
PTS system, N-acetylglucosamine-specific IIA component (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=3 Tax=Coprobacillus RepID=H1AHD0_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHQ47458.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_122G1_scaffold_27_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19301..22507
DNA (3207bp) protein (1069aa)
SNF2 family N-terminal domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90006.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SNF2-related protein
L1_007_122G1_scaffold_27_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22621..22842
DNA (222bp) protein (74aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31400.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_122G1_scaffold_27_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22999..24990)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R542_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90004.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
internalin-like protein
L1_007_122G1_scaffold_27_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25003..29394)
DNA (4392bp) protein (1464aa)
Fibronectin type III domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4X3_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDS18725.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycoside hydrolase family 16
L1_007_122G1_scaffold_27_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29680..30519)
DNA (840bp) protein (280aa)
SIS domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N4X2_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDS18724.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator
L1_007_122G1_scaffold_27_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30551..31546)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R9M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31396.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
regulatory protein (pfoS/R)
L1_007_122G1_scaffold_27_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31548..32912)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=3 Tax=Erysipelotrichaceae RepID=B0N4X0_9FIRM
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CCZ31395.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
matE; MATE efflux family protein
L1_007_122G1_scaffold_27_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32912..33667)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AHS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47375.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_122G1_scaffold_27_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34177..34653
DNA (477bp) protein (159aa)
Glutathione peroxidase n=5 Tax=Erysipelotrichaceae RepID=B0N4W8_9FIRM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glutathione peroxidase
L1_007_122G1_scaffold_27_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34842..35336
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31392.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_122G1_scaffold_27_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35349..35711)
DNA (363bp) protein (121aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, cellobiose-specific, IIB component n=5 Tax=Erysipelotrichaceae RepID=B0N4W6_9FIRM
PTS system, cellobiose-specific, IIB component {ECO:0000313|EMBL:EDS18718.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_122G1_scaffold_27_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35939..36658)
DNA (720bp) protein (240aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=4 Tax=Coprobacillus RepID=C3RPB1_9FIRM
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EHQ47371.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
N-acetylmuramoyl-L-alanine amidase
L1_007_122G1_scaffold_27_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(36795..37655)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=4 Tax=Erysipelotrichaceae RepID=B0N4W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47370.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_27_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

37843..39774
DNA (1932bp) protein (644aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QRW1_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ31388.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
diguanylate cyclase (GGDEF) domain
L1_007_122G1_scaffold_27_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(39839..41785)
DNA (1947bp) protein (649aa)
licR3; putative licABCH operon regulator (EC:2.7.1.69 2.7.1.-)
HTH domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N4W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89991.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_122G1_scaffold_27_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(41797..43236)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R528_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47367.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glycoside hydrolase
L1_007_122G1_scaffold_27_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(43248..44174)
DNA (927bp) protein (309aa)
Mannose-6-phosphate isomerase, class I n=2 Tax=Coprobacillus RepID=G9R527_9FIRM
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EHM89989.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mannose-6-phosphate isomerase
Displaying items 1-30 of 253 in total

View Taxonomy