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L1_007_122G1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_29_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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562..1884
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XE28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10644.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_29_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2129..2923
-----------------
DNA (795bp)
protein (265aa)
Chain length determinant protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X774_9CLOT
Chain length determinant protein {ECO:0000313|EMBL:CDA10645.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
capsular polysaccharide biosynthesis protein
L1_007_122G1_scaffold_29_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2936..3655
-----------------
DNA (720bp)
protein (240aa)
ywqD1; tyrosine-protein kinase YwqD (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPD7_9CLOT
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDA10646.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_007_122G1_scaffold_29_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3951..5834
-----------------
DNA (1884bp)
protein (628aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACD6_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDQ95595.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative polysaccharide biosynthesis protein
L1_007_122G1_scaffold_29_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5899..6537
-----------------
DNA (639bp)
protein (213aa)
Bacterial sugar transferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4P5_9CLOT
Bacterial sugar transferase {ECO:0000313|EMBL:CDA10648.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
sugar transferase
L1_007_122G1_scaffold_29_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6549..7631
-----------------
DNA (1083bp)
protein (361aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDQ95597.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDQ95597.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACD8_9FIRM
glycosyl transferase 4
L1_007_122G1_scaffold_29_7
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7628..8719
-----------------
DNA (1092bp)
protein (364aa)
Glycosyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHS57844.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
Glycosyltransferase
L1_007_122G1_scaffold_29_8

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8734..9618
-----------------
DNA (885bp)
protein (295aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ39330.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
GntR family transcriptional regulator
L1_007_122G1_scaffold_29_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9622..10764
-----------------
DNA (1143bp)
protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X778_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHS57842.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
capsular polysaccharide biosynthesis protein
L1_007_122G1_scaffold_29_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10786..11898
-----------------
DNA (1113bp)
protein (371aa)
UPI0003D5C04A related cluster n=1 Tax=unknown RepID=UPI0003D5C04A
Glycosyltransferase {ECO:0000313|EMBL:ETI91484.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Glycosyltransferase
L1_007_122G1_scaffold_29_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11913..12905
-----------------
DNA (993bp)
protein (331aa)
UPI0003D5C8AA related cluster n=1 Tax=unknown RepID=UPI0003D5C8AA
Uncharacterized protein {ECO:0000313|EMBL:ETI91483.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Glycosyl transferase family 2.
L1_007_122G1_scaffold_29_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12898..13866
-----------------
DNA (969bp)
protein (323aa)
UPI0003D5F3EA related cluster n=1 Tax=unknown RepID=UPI0003D5F3EA
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:ETI91482.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_122G1_scaffold_29_13
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13886..15043
-----------------
DNA (1158bp)
protein (386aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003616A22
Uncharacterized protein {ECO:0000313|EMBL:EOO34887.1}; TaxID=1053246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM019.;"
galactosyl transferase
L1_007_122G1_scaffold_29_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15119..15727
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Actinobacillus minor NM305 RepID=C5S0R0_9PAST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69222.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_007_122G1_scaffold_29_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15708..16379
-----------------
DNA (672bp)
protein (224aa)
Serine acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9G6_CLOBU
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:AGX43940.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_122G1_scaffold_29_16
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16417..17397
-----------------
DNA (981bp)
protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEX3_9CLOT
Putative glycosyltransferase-possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide {ECO:0000313|EMBL:EXJ23323.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
family 2 glycosyl transferase
L1_007_122G1_scaffold_29_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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17399..18865
-----------------
DNA (1467bp)
protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCI2_9CLOT
polysaccharide biosynthesis protein
Tax=BJP_IG2102_Clostridiales_34_350
L1_007_122G1_scaffold_29_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18910..19956
-----------------
DNA (1047bp)
protein (349aa)
UPI0003D640CB related cluster n=1 Tax=unknown RepID=UPI0003D640CB
Carbamoyl phosphate synthase-like protein {ECO:0000313|EMBL:ETI91185.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbamoyl phosphate synthase-like protein
L1_007_122G1_scaffold_29_19
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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19977..21080
-----------------
DNA (1104bp)
protein (368aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D3G1_9FIRM
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:ERI90853.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L1_007_122G1_scaffold_29_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21098..22165
-----------------
DNA (1068bp)
protein (356aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CBE8
L1_007_122G1_scaffold_29_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22177..23046
-----------------
DNA (870bp)
protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X7K8_9CLOT
glucose-1-phosphate thymidylyltransferase
L1_007_122G1_scaffold_29_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23036..23509
-----------------
DNA (474bp)
protein (158aa)
Predicted acetyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZG7_9FIRM
Predicted acetyltransferase
Predicted acetyltransferase {ECO:0000313|EMBL:CBL27177.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_122G1_scaffold_29_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23707..24666)
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95616.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative membrane protein
L1_007_122G1_scaffold_29_24
unknown

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24770..25015
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

L1_007_122G1_scaffold_29_25
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25080..26186
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Bacillus cereus Rock3-28 RepID=C2UZL1_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EEL33084.1}; TaxID=526983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus Rock3-28.;"
hypothetical protein
L1_007_122G1_scaffold_29_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26285..27175
-----------------
DNA (891bp)
protein (297aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HME6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97654.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_122G1_scaffold_29_27
unknown

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27336..27515
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

L1_007_122G1_scaffold_29_28
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27479..28663
-----------------
DNA (1185bp)
protein (395aa)
Uncharacterized protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CJ46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESE31343.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
L1_007_122G1_scaffold_29_29
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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28812..29324
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG78383.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
L1_007_122G1_scaffold_29_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29556..30398
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XE55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10674.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
Displaying items 1-30 of 183 in total

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