ggKbase home page

L1_007_122G1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_38_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

123..1424
-----------------
DNA (1302bp)
protein (434aa)
Citrate transporter n=2 Tax=Clostridium RepID=D3A9B1_9CLOT
Citrate transporter family protein {ECO:0000313|EMBL:CCZ60964.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
H+/gluconate symporter and related permeases
L1_007_122G1_scaffold_38_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2033..2776
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01571.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_38_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3425..4312)
-----------------
DNA (888bp)
protein (296aa)
LysR substrate binding domain protein n=2 Tax=Clostridium RepID=D3A9B5_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ60963.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transcriptional regulator, LysR family
L1_007_122G1_scaffold_38_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4538..5539
-----------------
DNA (1002bp)
protein (334aa)
Metallo-beta-lactamase domain protein n=2 Tax=Clostridium RepID=D3A9B7_9CLOT
Putative metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCZ60962.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
zinc metallohydrolase
L1_007_122G1_scaffold_38_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5613..5750
-----------------
DNA (138bp)
protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9B8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01577.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_38_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5974..6684)
-----------------
DNA (711bp)
protein (237aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9B9_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFD01578.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
4Fe-4S ferredoxin
L1_007_122G1_scaffold_38_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6825..7475
-----------------
DNA (651bp)
protein (217aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium RepID=D3A9C0_9CLOT
Putative cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CCZ60960.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cAMP-binding protein
L1_007_122G1_scaffold_38_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7756..8574
-----------------
DNA (819bp)
protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9C2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01581.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
beta-lactamase
L1_007_122G1_scaffold_38_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8577..9662
-----------------
DNA (1086bp)
protein (362aa)
Putative o-succinylbenzoate synthase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9C3_9CLOT
Putative o-succinylbenzoate synthase {ECO:0000313|EMBL:EFD01582.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
mandelate racemase/muconate lactonizing protein
L1_007_122G1_scaffold_38_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9729..11684
-----------------
DNA (1956bp)
protein (652aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9C4_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFD01583.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
family 5 extracellular solute-binding protein
L1_007_122G1_scaffold_38_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11850..12797
-----------------
DNA (948bp)
protein (316aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9C5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFD01584.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L1_007_122G1_scaffold_38_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12794..13807
-----------------
DNA (1014bp)
protein (338aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3A9C6_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFD01585.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L1_007_122G1_scaffold_38_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13847..14899
-----------------
DNA (1053bp)
protein (351aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D3A9C7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFD01586.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_007_122G1_scaffold_38_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14896..15831
-----------------
DNA (936bp)
protein (312aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9C8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFD01587.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC transporter
L1_007_122G1_scaffold_38_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16070..17044
-----------------
DNA (975bp)
protein (325aa)
NlpC/P60 family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D0_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:EFD01589.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
NLP/P60 protein
L1_007_122G1_scaffold_38_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17124..17969
-----------------
DNA (846bp)
protein (282aa)
Putative beta-lactamase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D1_9CLOT
Putative beta-lactamase {ECO:0000313|EMBL:EFD01590.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
beta-lactamase
L1_007_122G1_scaffold_38_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17960..18853)
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01591.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_38_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18986..19816
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01592.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_38_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19782..20957
-----------------
DNA (1176bp)
protein (392aa)
HAMP domain protein n=2 Tax=Clostridium RepID=D3A9D4_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ60948.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sensor with HAMP domain
L1_007_122G1_scaffold_38_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20908..22620
-----------------
DNA (1713bp)
protein (571aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVN4_9CLOT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CCZ60947.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
single-stranded-DNA-specific exonuclease RecJ
L1_007_122G1_scaffold_38_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22646..23773
-----------------
DNA (1128bp)
protein (376aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D6_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFD01595.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
oxidoreductase domain-containing protein
L1_007_122G1_scaffold_38_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24044..25291
-----------------
DNA (1248bp)
protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Clostridium RepID=D3A9D7_9CLOT
L1_007_122G1_scaffold_38_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25489..26565
-----------------
DNA (1077bp)
protein (359aa)
yrrT; putative methyltransferase YrrT (EC:2.1.1.-)
Methyltransferase domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9D9_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EFD01598.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_38_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27045..27224
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3A9E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60943.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_38_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27363..28226
-----------------
DNA (864bp)
protein (288aa)
Phenazine biosynthesis protein, PhzF family (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E1_9CLOT
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:EFD01559.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
phenazine biosynthesis protein PhzF family
L1_007_122G1_scaffold_38_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28294..28968
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01560.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_38_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29068..29583
-----------------
DNA (516bp)
protein (172aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E3_9CLOT
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFD01561.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
lysozyme M1
L1_007_122G1_scaffold_38_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29682..30242
-----------------
DNA (561bp)
protein (187aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E4_9CLOT
phosphate acetyltransferase
L1_007_122G1_scaffold_38_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30256..31137
-----------------
DNA (882bp)
protein (294aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E5_9CLOT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFD01563.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
NAD-dependent epimerase/dehydratase
L1_007_122G1_scaffold_38_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31193..32182
-----------------
DNA (990bp)
protein (330aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9E6_9CLOT
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EFD01564.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
molybdopterin dehydrogenase FAD-binding protein
Displaying items 1-30 of 148 in total

View Taxonomy